FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807107

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807107
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134271
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG127129.467420366274176No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA55594.140134504099917No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA50353.7498789761005726No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG43183.2158842937045224No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA41093.060228939979593No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG33772.5150628207133336No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG28872.1501292162864654No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG25741.9170185669280784No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC21751.6198583461804856No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT19451.448562980837262No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT18121.3495095739213976No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA15501.1543818099217256No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA14951.1134198747309545No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA14041.0456464910516792No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA13911.035964579097497No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC13140.9786178698304177No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC12510.9316978349755346No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA12480.9294635476014924No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA10330.769339619128479No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT9860.7343357836018202No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA9540.7105033849453717No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9310.6933738484110493No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA9170.6829471739988531No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT8620.6419852388080822No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7640.5689985179227085No Hit
CATAGACGGGCCAGAGAATAGTGCTAGACCAAAGCTAGAAACTCCCATCT7510.5593166059685264No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT7400.5511242189303721No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC7130.5310156325639936No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT7110.5295261076479657No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA7000.5213337206098115No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC6920.5153756209456994No Hit
CATAGATGTGCCACATACCTTTCCCAGGGTAATGGAGGAGTATGGGATCT6650.4952670345793209No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGAATTTGCAAATACAGAATC6540.4870746475411667No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGTCATTCTTCTCTGGGGGCTCT6530.4863298850831527No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC6490.4833508352510967No Hit
CATAGAATACAACACACTCTCTGCCCTGTAGACCAAAGCTAGAAACTCCC6470.48186131033506857No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG6420.47813749804499855No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5800.43196222564812947No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA5750.42823841335805946No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT5630.41930126386189126No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAGGGTGGGGAAAGAGAGC5590.4163222140298352No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT5560.41408792665579314No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT5550.4133431641977791No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCACAACTGGCATCTGGTGATCT5540.4125984017397651No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGAGTCCAGTGAACTCAAG5500.409619351907709No Hit
CATAGATGCTTCTGATATGTTGCCGTATTGGGGATGGCTGGTTGAATCTA5470.40738506453366696No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC5080.37833932867112036No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA4990.3716364665489942No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT4660.3470593054345317No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCGGTCATTCTTCTCTGGGGGCTC4600.3425907306864475No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC4470.33290881873226535No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA4450.3314192938162373No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG4290.31950309448801306No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA4200.31280023236588694No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAACTCTCAGTTGTGTGTGTGGTC4030.3001392705796486No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA3810.2837544965033403No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACTCTCAGTTGTGTG3790.28226497158731223No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT3730.27779639683922813No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGAACAGCTAAAAATCTTG3710.2763068719232001No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA3690.2748173470071721No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3500.26066686030490577No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACATGTGTGAGAGGGAAGGAC3480.2591773353888777No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAACTGGCAAACTAACACAG3420.2547087606407936No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT3360.2502401858927095No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTACGGTAGCACAACTGGCA3340.24875066097668147No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3270.24353732377058335No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT3270.24353732377058335No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGCACATCTACAAGGACACT3220.23981351148051328No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3140.23385541181640115No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGCATAGAGAACAGCTAAAAATCTTG3110.2316211244423591No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG3050.22715254969427498No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATTCTGCTGAGATTGGCCTG3030.22566302477824698No Hit
CATAGAAGGAGCTGGACTGGATGGACTCACATGTGTGAGAGGGAAGGACT3010.22417349986221893No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTAGATGCCTCTTGTAGAAGG2950.21970492511413486No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2930.2182154001981068No Hit
CATAGACGGGCCAGAGAATAGTGCTAGACACTGACGACATGGTGGAGGGC2880.21449158790803674No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACTCTATGAGACCAAGTCTCTGC2870.21374682545002274No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGACACTTTGGACTCTGCCTCTA2790.20778872578591057No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGGCTGAGAAAGGAGGATCACT2780.20704396332789657No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCTCCCTCATTATCCCTGTGCCTC2780.20704396332789657No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGTGGCCTGTTCAC2740.2040649134958405No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCACATAGAACAGCTAAAA2730.2033201510378265No Hit
CATAGATGCTTCTGATATGTTGCCGTACCTCTAACTTCATAGCACATCAT2720.2025753885798125No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA2700.20108586366378445No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTACGACATGTGTGAGAGGGA2690.20034110120577042No Hit
CATAGATGATCCATCTACCTCTGCTTCAATAGAACAGCTAAAAATCTTGG2680.1995963387477564No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGGGTAATGGAGGAGTATGGGATC2670.19885157628974237No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTAGACCAAAGCTAGAAACTCC2670.19885157628974237No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTAATGGAGGAGTATGGGATCT2640.19661728891570032No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCAGATCCTTGTCAACTCTT2620.1951277639996723No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC2400.17874298992336396No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2330.17352965271726584No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGTTCTGCA2330.17352965271726584No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGACATGTGTGAGAGGGAAGGAC2240.1668267905951397No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATAGAACAGCTAAAAATCT2220.16533726567911164No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT2140.15937916601499952No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTACACATAGAACAGCT2130.1586344035569855No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACTGACGACATGTGTGAGAGGGA2120.1578896410989715No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2120.1578896410989715No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2100.15640011618294347No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2080.15491059126691542No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGTGTGAGAGGGA2070.1541658288089014No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACACTGACGACATGGTTCT2030.15118677897684535No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG2010.1496972540608173No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCTACACATAGAGACATGT1990.14820772914478927No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACTGACGACATGGTCCTGC1990.14820772914478927No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCATAGAACAGCTAAAAATCTT1980.14746296668677525No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCCGGTCATTCTTCTCTGGGGGCT1980.14746296668677525No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1970.14671820422876125No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCATAGAGGCACAGGGTAAT1960.14597344177074723No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG1940.1444839168547192No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGTGGAG1940.1444839168547192No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGAAAACAATTAGAAAACGAGGA1940.1444839168547192No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA1940.1444839168547192No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA1930.14373915439670515No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATACATGTGTGAGAGGGA1810.13480200490053698No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA1810.13480200490053698No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1770.1318229550684809No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACAGGGTGGGGAA1730.12884390523642486No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT1710.1273543803203968No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1700.12660961786238278No Hit
CATAGAATACAACACACTCTCTGCCCTGTACATTTCGGCAAACTAACACA1680.12512009294635476No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA1650.12288580557231271No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA1630.12139628065628467No Hit
CATAGATCATGGGACTTCAGCATGGCATGGTTCTGCACATCTACAAGGAC1630.12139628065628467No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1630.12139628065628467No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1620.12065151819827066No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGGAGACAGCCGCTCACCT1620.12065151819827066No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1570.11692770590820058No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG1570.11692770590820058No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTAGAACCATGCAGGTGCA1570.11692770590820058No Hit
CATAGAACATCTACAGAACTCTCTACCCACACGGACTACAAGTACCCACC1570.11692770590820058No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTACACATAGAACATTAGCTTAGT1550.11543818099217255No Hit
CATAGATGATCCATCTACCTCTGCTTCATCTACCTCTAACTTCATAGCAC1550.11543818099217255No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1550.11543818099217255No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1540.11469341853415853No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1530.11394865607614452No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACGGACTACAAGTACCCACCAC1500.11171436870210247No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTATGAGACCAAGTCTCTGCTAC1490.11096960624408846No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTAGACCACACGCACAACTGGCA1470.10948008132806042No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACGGACTACAAGTACCCAC1470.10948008132806042No Hit
CATAGATGCTTCTGATATGTTGCCGTGGAGAGGAGGGGGCAGAATATCTA1440.10724579395401837No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1400.10426674412196231No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGTAAGGGTGGGGAAA1400.10426674412196231No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAACAGGTGCA1390.10352198166394828No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCAGGGTAGGGTAATGGAGGA1360.10128769428990625No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)