FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences173969
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG5479431.496416028142942No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG90985.22966735452868No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG64043.6811156010553603No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA56413.2425317154205637No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC40612.334323931275112No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG37152.1354379228483236No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA35962.0670349315107863No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC34912.006679350918842No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA34641.9911593444809133No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG29991.7238703447165875No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT17911.0294937603825969No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG16320.9380981669147952No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC12190.7006995499198133No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC12110.6961010294937604No Hit
CATAGATCACCTACACAGACAGCTTTCCACTGACGACATAGTTTTTCCAA11680.671383982203726No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT11030.634021003742046No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA10560.6070046962389851No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGCAAGCATGTT10510.604130620972702No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA10440.6001069155999057No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGAGGGAAGGAAGGGCAAACT9930.5707913478838184No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA9720.5587202317654295No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA9710.5581454167121729No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT8720.501238726439768No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA8560.49204168558766215No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC8540.4908920554811489No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT8310.47767130925624685No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTGCAGCTATATTGGA8240.4736476038834505No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA7870.45237944691295573No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG7750.44548166627387636No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCATCTATGGGAGGGAAGGAA7000.40237053727963035No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA6330.3638579287114371No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTATTCACCAAGTCACCCAGCCT6180.3552357029125879No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAAATCGAGC6110.3512119975397916No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAGTTTTTCCAAATATAAGAT6030.3466134771137387No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA5870.3374164362616328No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG5850.3362668061551196No Hit
CATAGAAGATCCCATAGCAGCTTTGCACACTGGAGACAGCCGCTCACCTC5150.29602975242715657No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGAAAGCAATCACCGCCA4950.2845334513620243No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGTGCAGCTATATTGGAGGAAA4860.27936011588271475No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC4730.27188752019037876No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA4610.2649897395512994No Hit
CATAGAAGATCCCATAGCAGCTTTGCTAATAGTTTTTCCAAATATAAGAT4570.2626904793382729No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT4430.25464306859268027No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG4410.25349343848616707No Hit
CATAGAAGATGGTCTGCTACACTGGTACTGCCCACACTCATGCAAAGCTG4070.23394972667544217No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA3930.22590231592984955No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC3900.22417787077007972No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCAGTGCAGCTATATTGGAG3890.22360305571682312No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAGAAGTAAGGTGACTCTCCCCAG3810.2190045352907702No Hit
CATAGATCACCTACACAGACAGCTTTCCTACGGGGGCAGATTAACAGGTC3800.21842972023751356No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT3800.21842972023751356No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG3760.21613046002448713No Hit
CATAGACACCTGGATCCTGTGTTGTCTCATTTCCCCTCTCTCTGAATAAC3760.21613046002448713No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA3690.2121067546516908No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC3620.2080830492788945No Hit
CATAGACCCTTCTCCATGCCACATCAAGAATGAGGAGAGTACTACTTTCT3590.20635860411912466No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTAGGGATTATCAGTAGTGCT3450.19831119337353204No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA3250.18681489230839976No Hit
CATAGATCACCCAGGTAATCACTAGGTAATTCACCAAGTCACCCAGCCTC3220.18509044714862993No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG3010.17301933103024103No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTAGGTAGAGGAGTTTCAAACATCT2820.16209784501836536No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT2710.1557748794325426No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT2600.14945191384671982No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTATGCCATGT2530.14542820847392351No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTCTTATAGCCAGTGTCTCCCCT2450.1408296880478706No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA2330.13393190740879124No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC2270.13048301708925153No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT2260.12990820203599493No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA2200.12645931171645522No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGGCTCCCAAGTCACTTCACCCA2140.12301042139691554No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCTTCTTATAGCCAGTGTCTCCCC2130.12243560634365894No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2120.12186079129040232No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG2110.1212859762371457No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2100.12071116118388908No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAACCTCTCCAGCCTAAAGACACA2090.12013634613063247No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCACACTCATGCAAAGCTGGT2040.1172622708643494No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1970.11323856549155309No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAAGTCTCTGCTACCGT1960.11266375043829649No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGGCTAGTCCGTCACCCC1960.11266375043829649No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1860.10691559990573032No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1780.10231707947967741No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1760.10116744937316419No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)