FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807117

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807117
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130945
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA129799.911795028447058No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG81006.185803199816717No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG66585.084577494367864No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC60664.632479285196075No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG49133.7519569284814236No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA43013.2845851311619385No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA40233.0722822559089695No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT33612.566726488220245No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC33462.5552712971094733No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG32162.455992974149452No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA29692.2673641605254113No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT26982.060407041124136No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA26462.0206957119401276No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA25801.9702928710527319No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA20681.5792890144717249No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT17551.3402573599602887No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA17371.3265111306273625No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA13821.0554049410057658No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC13651.0424223910802246No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC13141.003474741303601No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT11860.905723777158349No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT11030.8423383863454122No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT10780.8232464011607926No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT10590.8087364924204818No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG9840.7514605368666234No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG8680.6628737256099889No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC8560.6537095727213716No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA8230.6285081522776739No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA7980.6094161670930544No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG7610.5811600290198174No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG7370.5628317232425828No Hit
CATAGACCAGCAGACACTCCCATCATACACTGGAGACAGCCGCTCACCTC6870.5246477528733438No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6510.4971552942074917No Hit
CATAGAGTCCAACTATTCCAGCACCACACATAGAGATCCCACCATTTGCC6140.46889915613425487No Hit
CATAGAAGCCATGAACACAGGATTGACACTGACGCTATACCACACTACAC6020.45973500324563743No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGGCTCAGGTATGTCTTT5820.44446141509794185No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC5150.3932948948031616No Hit
CATAGATCAAGGAAAACACCAGCCCAGAGATCCCACCATTTGCCATCTAT5090.38871281835885296No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTTGCTGAAGTGATGGGCTA5050.38565810072931384No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG5030.38413074191454427No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGATGCTGAAGTGATGGGCTAGA5010.3826033830997747No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC4910.37496658902592694No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT4870.3719118713963878No Hit
CATAGATCACGTAGAAACTGGAGAGGCACACTGACGACATGGTTCTACAC4850.37038451258161825No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4490.34289205391576616No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC4480.3421283745083814No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGATCATTGTTCACTG4450.33983733628622703No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGATCATTGTTCAC4430.33830997747145747No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA4170.3184543128794532No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4150.31692695406468363No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3940.30088968650960324No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGCTATACCACACTA3820.2917255336209859No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT3810.2909618542136011No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTACACTGACGCTATACCACACTA3800.29019817480621635No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGACATTGCTTCTTG3630.2772156248806751No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT3490.2665241131772882No Hit
CATAGAAAAAACAGTTGGCCAGGCATTACGGTGGAAGGGTAAGAGAGGGT3260.24895948680743824No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGATCATTGTTCACTG3220.2459047691778991No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGATCATTGTTCACTGC2900.22146702814158617No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTACTGCCCTCTCTGCTGTT2840.2168849516972775No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT2840.2168849516972775No Hit
CATAGACTCATTGCACTTTCCACAACTGTACCTGACGATCATTGTTCACT2760.21077551643819925No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2680.204666081179121No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGGCTCAGGTATGTCTTT2580.19702928710527318No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2580.19702928710527318No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTTCAGGCTAATCTGAAATCTTCG2460.18786513421665585No Hit
CATAGACTCATTGCACTTTCCACAACTGTACTCATTGCTTCTTGTGGTAA2300.17564626369849937No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2270.17335522547634502No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2250.17182786666157548No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACACATAGAAATGATGCTGAAGT2240.1710641872541907No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGACATTGCTTCTTGTGG2210.16877314903203636No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA2160.16495475199511245No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2160.16495475199511245No Hit
CATAGACGTGACTAAAAGCATGTTGGTACATGACGACATGGCTCAGGTAT2070.15808163732864944No Hit
CATAGATGAGGACACCATAAAGACAACAACACTGACGATCATTGTTCACT1930.14739012562526252No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC1870.14280804918095383No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGCTATACCA1860.14204436977356905No Hit
CATAGATCACGTAGAAACTGGAGAGGTGGAAGGGTAAGAGAGGGTCTATG1820.13898965214402995No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA1760.13440757569972125No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1700.12982549925541256No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1690.12906181984802778No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTACACTGGAGACAGCCGCT1630.12447974340371912No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT1590.12142502577417999No Hit
CATAGACTCATTGCACTTTCCACAACTGTCACTGACGACATGTTGTGCAC1590.12142502577417999No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGGCTCAGGTATG1580.12066134636679522No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1550.11837030814464088No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCCCACGCTGTCCTTCTCTG1520.11607926992248654No Hit
CATAGACAGTGCCTTTGTGCGTGTTAACACTGACGACATGGGTCTACCAG1510.11531559051510176No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTACTGTGTGCTTGAACC1460.11149719347817787No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA1450.11073351407079308No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT1420.10844247584863875No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT1410.10767879644125397No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATGGTTCTACACATAGAAATGAT1390.10615143762648441No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1380.10538775821909963No Hit
CATAGAGAAGACTCCCTTCCCCACACCCTCTTCTTCTATGAGACCAAGTC1320.10080568177479093No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTCTACAAAGGATTCTGGGC1320.10080568177479093No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)