FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807118

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807118
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130945
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT128219.791133682080263No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG80146.120126770781626No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG64204.902821795410286No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG60094.588949558975142No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG48713.719882393371263No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC42593.2525105960517777No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA39953.0508992325021955No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC33382.5491618618503953No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT33052.5239604414066976No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG31492.4048264538546715No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA29892.282637748673107No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT26252.0046584443850475No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT25771.968001832830578No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA25161.921417388980106No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT20501.5655427851387986No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT17371.3265111306273625No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT16701.2753446103325823No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC13891.0607506968574594No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA13671.0439497498949941No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC12890.9843827561189813No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT11650.8896865096032686No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT10650.8133185688647906No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT10200.7789529955324755No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG9810.7491694986444691No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG9500.7254954370155409No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG8560.6537095727213716No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC8260.6307991904998281No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT7960.6078888082782847No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT7880.6017793730192065No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT7420.5666501202795067No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG7330.5597770056130437No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG7250.5536675703539654No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTATGATGGGAGTGTCTGCTGGTC6700.5116652029478025No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6410.48951850013364384No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTGGTGCTGGAATAGTTGGA5970.45591660620871355No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTCAATCCTGTGTTCATGG5830.4452250945053267No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGGGTCCTAAATGTCTT5810.4436977356905571No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGAGTCTTCTCTATGTGTAGAACCA5590.4268967887280919No Hit
CATAGATCTAGCCCATCACTTCAGCATCATGCAGGCCCTTCAGCATCATT5190.3963496124327007No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG5070.3871854595440834No Hit
CATAGATCTAGCCCATCACTTCAGCAACACTGTCATTGTGGGTTTTAACT5000.38183970369238995No Hit
CATAGATGGCAAATGGTGGGATCTCTGGGCTGGTGTTTTCCTTGATCTAT4940.37725762724808126No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG4910.37496658902592694No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT4870.3719118713963878No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT4830.3688571537668487No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG4450.33983733628622703No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG4390.33525525984191834No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTTACAAAAATTGGGA4370.3337279010271488No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA4350.3322005422123792No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG4120.3146359158425293No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT4090.312344877620375No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG4020.3069991217686815No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3930.3001260071022185No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG3810.2909618542136011No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAACAACAACAAAACTCG3770.287907136584062No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT3700.2825613807323686No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCATTAGGAAGTCTTCT3630.2772156248806751No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTGGGTCCTAAATG3600.27492458665852076No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT3420.2611783573255947No Hit
CATAGACCCTCTCTTACCCTTCCACCGTAATGCCTGGCCAACTGTTTTTT3260.24895948680743824No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGGGGTCCTAAATGTCTTT3120.23826797510405132No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGGGCTGGTGTTTTCC2850.21764863110466226No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCAGACCCAGGCTACACATCTAT2810.21459391347512313No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGGTACAGTTGTGGAAAGTGC2790.21306655466035357No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT2750.21001183703081447No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTACGGTAGCAGGCCCTTCAGCATC2720.20772079880866015No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACCCTGGGAGAAGAAA2530.19321089006834932No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2490.1901561724388102No Hit
CATAGAACACGAAGATTTCAGATTAGCCTGAACACGAATGAGGAAACAGG2350.17946466073542328No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT2270.17335522547634502No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGTACAGTTGTGGAAAGTGCAA2270.17335522547634502No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTGGGCTGGTGTTT2180.166482110809882No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG2160.16495475199511245No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGACCATGGAGAGAATA2110.16113635495818857No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCATGTACCAACATG2020.15426324029172553No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTTGTCTTTATGGTG1890.1443354079957234No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGTGGGTTGAGGGAGT1880.1435717285883386No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGACTGTTAATATAGAAG1800.13746229332926038No Hit
CATAGACCCTCTCTTACCCTTCCACCTCTCCAGTTTCTACGTGATCTATG1740.13288021688495172No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGAGACAGTTGTGGAAAGTGC1680.128298140440643No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG1660.12677078162587346No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTACACTGACGAATGAGGAAACAG1640.1252434228111039No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGACTGTTAATATAGAA1620.12371606399633434No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT1620.12371606399633434No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1490.1137882317003322No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTTAA1470.11226087288556265No Hit
CATAGAATCTGGTTCAAGCACACAGTAGACTGTTAATATAGAAGAGACAC1470.11226087288556265No Hit
CATAGAGCAACAATGAAGGTGCACAACATGTCGTCAGTGACAGTTGTGGA1450.11073351407079308No Hit
CATAGATTCAGAGAAGGACAGCGTGGGAGACAGTTGTGGAAAGTGCAATG1430.10920615525602352No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT1420.10844247584863875No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGG1380.10538775821909963No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC1370.10462407881171486No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT1360.10386039940433008No Hit
CATAGATGGCCCAGAATCCTTTGTAGACCCATTGTAGATTTCTTTCACCT1310.10004200236740615No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)