FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98313
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3028530.804674864972082No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA44714.547720037024606No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT29342.9843459155961063No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC27272.7737939031460743No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG23332.373033067854709No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA20072.0414390772329196No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA18321.8634361681568055No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA12861.3080670918393293No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA12421.2633120747001922No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT11921.2124541006784455No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT11131.1320985017240854No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG10711.089377803545818No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10001.0171594804349375No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG9270.942906838363187No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8360.8503453256436077No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7550.7679554077283778No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA7270.7394749422761995No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC6920.7038743604609767No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA6870.698788563058802No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6840.6957370846174972No Hit
CATAGATGATCCATCTACCTCTGCTTCATCATAGACACACTGAGAATTTG6400.65098206747836No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG6140.6245359209870516No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGTTCTACACA5940.6041927313783527No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA5640.5736779469653046No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA5500.5594377142392155No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTAATTAACTTAGCAACC5350.5441803220326915No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT5180.5268886108652976No Hit
CATAGAGAACAGCCCTGAGAGAATGCATGGTTCTACACATAGAGAACAGC4870.4953566669718145No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA4850.49332234801094466No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4690.47704779632398564No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4670.4750134773631158No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4410.44856733087180733No Hit
CATAGACTCTGTTTTGCTACCTGGGGATAGACATGTGTGAGAGGGAAGGA4270.43432709814571824No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGGTTCTGCACATCTACAAGG3980.40482947321310514No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3890.3956750378891907No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATTAGGACACTTTGGACTCTGCCT3580.3641430939957076No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC3440.34990286126961845No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACACTGACGACATGGTTCT3360.341765585426139No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCATATCCTTTGCAGGGACATAG3070.3122679604935258No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3040.30921648205222096No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGACAGCTAGGGTGGGGAAAGAGAG3010.30616500361091614No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC2980.3031135251696114No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2960.30107920620874146No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2920.29701056828700173No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCCTCCCTCATTATCCCTGT2920.29701056828700173No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGGTTCTACACATAGAACAGCTAAA2900.2949762493261318No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2890.2939590898456969No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA2780.2827703355609126No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA2670.27158158127612825No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA2650.26954726231525844No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA2630.2675129433543885No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2620.2664957838739536No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGGTCTCATAGATCCCATACTCCC2600.2644614649130837No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGGGTCAT2450.24920407270655967No Hit
CATAGAATACAACACACTCTCTGCCCTGAATACAACACACTCTCTGCCTG2450.24920407270655967No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA2200.22377508569568624No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2130.21665496933264164No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2040.2075005340087272No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA1990.20241473660655257No Hit
CATAGATGTGCCACATACCTTTCCCACACGGACTACAAGTACCCACCACC1940.19732893920437786No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG1830.18614018491959355No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCACAGTGAAACA1820.1851230254391586No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1780.18105438751741884No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA1650.16783131427176468No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACGGAGATAGAGAGGTTGGTT1630.16579699531089478No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1590.16172835738915506No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGAGACATGGTTC1570.15969403842828517No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1530.15562540050654544No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1520.15460824102611048No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAAACTCCCATCTATGAGACCAAA1490.1515567625848057No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCGTACCTCTAACTTCATAGCACA1480.15053960310437073No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1410.14341948674132615No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1330.13528221089784667No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1310.1332478919369768No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAGTCTCTGC1300.13223073245654185No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT1260.1281620945348021No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG1260.1281620945348021No Hit
CATAGAGAACAGCCCTGAGAGAATGCACTGACGACATGGTTCTACACATA1250.1271449350543672No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1250.1271449350543672No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1220.12409345661306237No Hit
CATAGACCCCATGTGCAGTGTAAGCTAGACCAAAGCTAGAAACTCCCATC1210.12307629713262742No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1210.12307629713262742No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1210.12307629713262742No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGGGTGGGGAAAGAGAGCACTCTA1180.12002481869132262No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGTT1170.11900765921088767No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1160.11799049973045274No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTCAGCAAA1140.11595618076958286No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC1120.11392186180871298No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA1110.11290470232827804No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1100.11188754284784312No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCAGGGAAGCCCACACTTAGAAATG1080.10985322388697323No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTTGTAGAA1080.10985322388697323No Hit
CATAGATCATGGGACTTCAGCATGGCGGTATTTGCAGATTTGGACCTGCG1060.10781890492610337No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATCCTTGGAGAGAAATGC1040.10578458596523349No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1030.10476742648479855No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTCATAGACCAAAGCTAGAAA1030.10476742648479855No Hit
CATAGATGTGCCACATACCTTTCCCATCTATGAGACCAAAGCTAGAAACT1010.10273310752392868No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG1000.10171594804349374No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA1000.10171594804349374No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG990.10069878856305879No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)