FastQCFastQC Report
Wed 8 May 2024
EGAF00005807120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98313
Total Bases14.7 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3054631.070153489365598No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT44724.54873719650504No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT29563.006723424165675No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA26972.743279118733026No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG23232.3628614730503594No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA19962.030250322948135No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA17861.8166468320567983No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA13051.3273931219675932No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA12481.269415031582802No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT11901.2104197817175755No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG10741.0924292819871226No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT10501.0680174544566843No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA10091.026313915758852No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG9200.9357867220001423No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8560.8706885152523065No Hit
CATAGACCATCCCTTCTACAAGAGGCATCTATGTGTAGAACCATGTCGTC7660.7791441620131621No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7500.762869610326203No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA7290.7415092612370694No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7010.7130287957848911No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG6950.7069258389022814No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT6910.7028572009805417No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCAGTGTGTCTATGATGAA6430.6540335459196647No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG5980.6082613693000926No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA5730.5828323822892191No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT5430.552317597876171No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGGAGGAGAATGATAT5300.5390945246305169No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT5020.5106140591783386No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGCATT4980.5065454212565987No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT4910.4994253048935543No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4820.49027086956963983No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4800.4882365506087699No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA4550.46280756359789654No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC4340.44144721450876284No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATCCCCAGGTAGCAAAACAGA4280.43534425762615325No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA4050.41194958957614963No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3970.4038123137326701No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCAGCAGGGCAGAGAGTGT3630.3692288913978823No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAATAGGAGGAGCTGACTTACTGTT3400.3458342233478787No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGGACAATGGCTTCCA3140.31938807685657034No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCAGGAGGAGCTGACTTAC3080.3132851199739607No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3030.308199322571786No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3000.3051478441304812No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2990.3041306846500463No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2910.29599340880656677No Hit
CATAGAGGCACAGGGATAATGAGGGAGGGCACAGGGCAGAGAGTGTGTTG2860.2909076114043921No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCAGGAGGAGC2860.2909076114043921No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2830.2878561329630873No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA2790.28378749504134754No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA2700.27463305971743307No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2670.27158158127612825No Hit
CATAGAGGCACAGGGATAATGAGGGAGTATGGGATCTATGAGACCAGCAT2520.2563241890696042No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2520.2563241890696042No Hit
CATAGAGCCCCCAGAGAAGAATGACCCATAGAGCCCCCAGAGGAGAATGA2470.25123839166742956No Hit
CATAGAAGTACCATCAGAGTGAACAGGCAGAGAGTGTGTTGTATTCAGGG2430.24716975374568978No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA2260.22987804257829586No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2060.2095348529695971No Hit
CATAGAGGCACGATCTTGTTTCACTGTAGCAGAGACTTGGTCTCATAGAG2010.2044490555674224No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1950.1983460986848128No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGAAAGGTATGTGGCACA1880.19122598232176824No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1860.18919166336089838No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCACGATCTTGTTTCACTGAGCT1830.18614018491959355No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1800.18308870647828873No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1760.17902006855654898No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAATCTTTGGGAGGCTATTAGT1700.17291711167393936No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA1670.16986563323263454No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGCCTCTATGTGTAGAACCATGTCT1590.16172835738915506No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1570.15969403842828517No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1550.1576597194674153No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1530.15562540050654544No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGTCACTGACAGGTCTT1520.15460824102611048No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1440.14647096518263097No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA1400.14240232726089125No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1390.1413851677804563No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1350.13731652985871654No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1300.13223073245654185No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1280.130196413495672No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1270.12917925401523705No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1260.1281620945348021No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG1250.1271449350543672No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGCTTACACTGCACATGGGGTC1240.12612777557393223No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1230.1251106160934973No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA1200.12205913765219248No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1190.12104197817175756No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1180.12002481869132262No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA1170.11900765921088767No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCCCCAGGTAGCAAAACAGAGTCTA1170.11900765921088767No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC1160.11799049973045274No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGCAGAGACTTGGTCTCATAGAT1140.11595618076958286No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGTGCCCGGCTTCCTTGGGACA1140.11595618076958286No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA1130.11493902128914793No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1070.10883606440653831No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGAGGAAACATTGGAAAGA1060.10781890492610337No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGTTTCACTGAGCTGAG1060.10781890492610337No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGGCATTCTCTCA1040.10578458596523349No Hit
CATAGAGCAGCATTTCTCTCCAAGGATAGAGCAGCATTCTCTCAGGGCTG1010.10273310752392868No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT990.10069878856305879No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)