FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807126

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807126
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences219829
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG116545.301393355744692No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT112805.131261116595172No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT84263.8329792702509677No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG82593.7570111313793904No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT59452.7043747640211255No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT55842.540156212328674No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT54912.497850602058873No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT51782.3554672040540603No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC48522.2071701185921784No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT39781.8095883618630844No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT39691.8054942705466523No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT36991.6826715310536828No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG36311.6517383966628607No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG35021.5930564211273308No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC33451.5216372726073448No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACTTTCCCACCGCCCTTTT28511.2969171492387264No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG28051.2759917936214056No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT27471.249607649582175No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAGCAGCAAACAATTTCAGAAAGT24191.1004007660499753No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG23611.0740166220107448No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT23111.0512716702527873No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC21330.9702996419944593No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT19540.8888727147009721No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT19330.87931983496263No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT18470.8401985179389435No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT18020.8197280613567819No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT16020.7287482543249526No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG15530.7064582016021544No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT15050.6846230479145154No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGTCTCTCCCTCTCTC14720.6696113797542635No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC14320.6514154183478977No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13300.6050157167616648No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGAAGAAAGAAAACCCACA13150.5981922312342776No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT12880.5859099572849806No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT12430.565439500702819No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG12110.5508827315777263No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG11790.5363259624526336No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC11570.5263181836791324No Hit
CATAGAACTGACCATACACTTGCCCTAATAATCTGCTTTTACAAACTCAA11550.5254083856088141No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG10950.49811444349926537No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT10880.49493015025315135No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTGCTTTTACAAACTCAAG10350.47082050138971654No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT10230.4653617129678068No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT9830.4471657515614409No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA9800.4458010544559635No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT9490.43169918436602994No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC9200.4185071123464147No Hit
CATAGAGTTCCAGCAAAATGAAGGGGACGCATTCTTTCTCCAGACCTTCA9170.41714241524093726No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG8870.4034954441861629No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC8830.4016758480455263No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT8790.3998562519048897No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAAGTGCACAGTTTGGA8720.3966719586587757No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC8670.39439746348297994No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA8570.3898484731313885No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGTCTTATTGTCCTAAAG8220.37392700690081837No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG7850.35709574259992993No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATGCATTCTTTCTCCAGACCTTC7760.35300165128349764No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC7190.3270724062794263No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT7140.32479791110363054No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT6900.31388033425981104No Hit
CATAGAGCAGACAATGGATGATCAAGTGATTCTGCTTTTACAAACTCAAG6710.30523725259178724No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6660.30296275741599155No Hit
CATAGACAATTTCAGTGCGGCCGATGACACTGCTCACGATGGTATTACAT6520.2965941709237635No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGGCACAATGAGGCAATCTATG6430.29250007960733115No Hit
CATAGAGAAGCCAGGGAACAAAGTGGCCATGCTGAAGTCCCATGATCTAT6400.2911353825018537No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA6300.28658639215026227No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6290.2861314931151031No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT6100.2774884114470793No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCCAAGGTCAAGGGCAGGGA6040.27475901723612445No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG6020.2738492191658061No Hit
CATAGACCAGGACAATCACAGGGCACAAGTAGATGTGGTTGCATGGGGGT5830.2652061374977824No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTAGGTGGCTTCTGGTGCATCTATG5710.2597473490758726No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC5690.25883755100555433No Hit
CATAGAACTGACCATACACTTGCCCTGCTCACGATGGTATTACATGGTCT5310.24155138766950673No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT5210.23700239731791528No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT5180.23563770021243785No Hit
CATAGAACTGTCCCCTACTTTTCACCATACGGTAGGTGGCTTCTGGTGCA5170.2351828011772787No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATACGGTAGATGTGGTTGCATGGG4940.22472012336861832No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4780.21744173880607198No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG4740.2156221426654354No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT4720.21471234459511712No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT4690.21334764748963966No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4680.21289274845448053No Hit
CATAGAACTGACCATACACTTGCCCTACACTGCTCACGATGGTATTACAT4520.2056143638919342No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC4450.20243007064582016No Hit
CATAGACTTGTTGCCGAGACTGGAGTACACTGCTCACGATGGTATTACAT4450.20243007064582016No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG4430.20152027257550187No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA4280.1946967870481147No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT4230.19242229187231896No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT4180.1901477966965232No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATACGGTAGGTGGCTTCTGGTGC4140.18832820055588664No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAAGTGCACAGTTAGGC4080.18559880634493175No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATAGATGTGGTTGCATGGGGGTC4040.18377921020429516No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAGGACATTGGGGAATTCTATGT4010.18241451309881773No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGAAACCTGTGTGTGTA4000.18195961406365857No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT3850.1751361285362714No Hit
CATAGAACTGTCCCCTACTTTTCACCACACTGCTCACGATGGTATTACAT3780.17195183529015737No Hit
CATAGAACTGACCATACACTTGCCCTACGCTAACTTCGCCTGCCTTTCTC3770.1714969362549982No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTACGGTAGGTGGCTTCTGG3740.17013223914952078No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3710.16876754204404332No Hit
CATAGAGCAGACAATGGATGATCAAGTGATTCTCTGCTTTTACAAACTCA3680.1674028449385659No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3640.1655832487979293No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTTGTCTGGCACAAT3590.16330875362213357No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTACGGTTGCAGGATGAATGGGGAC3580.16285385458697443No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3550.16148915748149698No Hit
CATAGAACTGACCATACACTTGCCCTATAGACACTTGAAAGCTCCCTGGA3470.15784996520022382No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTAGGTGGCTTCTGGTGCAT3430.15603036905958723No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3320.1510264796728366No Hit
CATAGAACTGACCATACACTTGCCCTCTGGTCTAGGATGAGATAATTGCC3200.14556769125092686No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT3100.14101870089933538No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC3080.1401089028290171No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3070.13965400379385795No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2980.13555991247742563No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTACGGTTGCAGGATGAATG2970.1351050134422665No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2960.13465011440710734No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG2910.1323756192313116No Hit
CATAGAATAGCTGTGTTGAAGAACCTCACACTGCTCACGATGGTATTACA2880.13101092212583418No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTCTACGGTAGGTGG2850.12964622502035672No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCTCATAGACACTTGAAAGCTCCCT2770.12600703273908356No Hit
CATAGATGGCCCACTGACATTTTCCTACGGTTGCAGGATGAATGGGGACA2770.12600703273908356No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA2720.12373253756328784No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAGAACTGGCTCTGCTTTTACAAA2680.12191294142265124No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGAACGAAATTTAGGT2670.12145804238749208No Hit
CATAGACCAGGACAATCACAGGGCACTACACATGTACACGGCAGGACTGT2640.12009334528201465No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCCCAAAGTAGGCAATTCTATGT2620.11918354721169636No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTAGGTGGCTTCTGGTGCAT2560.11645415300074148No Hit
CATAGAACCTCAAGCCGGAAAACCTTGACACTGACGAAATGTTTGCTATT2410.10963066747335429No Hit
CATAGAGAAGCCAGGGAACAAAGTGGACACTTGAAAGCTCCCTGGATCTA2370.1078110713327177No Hit
CATAGACCAGGACAATCACAGGGCACTATACACATGTACACGGCAGGACT2270.10326208098112624No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2260.1028071819459671No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)