FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807127

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807127
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77540
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG75639.753675522311065No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA59937.728914108847047No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC49336.361877740521021No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG46045.937580603559453No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC42235.446221305132835No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG33834.362909466082023No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG31774.0972401341243225No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA23833.0732525148310548No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG18342.365230848594274No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA15251.9667268506577251No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC14801.9086922878514316No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT12041.5527469693061644No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA11981.5450090275986588No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT10751.3863812225947898No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT9741.2561258705184422No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC9661.2458086149084344No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC8351.0768635542945577No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG7801.0059324219757546No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT7400.9543461439257158No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA6340.8176425070931131No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT5590.7209182357492907No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG5480.70673200928553No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA5220.673200928553005No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA4520.5829249419654372No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC4430.5713180294041785No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT4240.5468145473304101No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA4180.5390766056229043No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT3820.49264895537786946No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT3810.4913592984266186No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAGTGAAGCAGAGCTTCCCA3640.46943513025535205No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG3440.4436419912303327No Hit
CATAGAAAAAACAGTTGGCCAGGCATCAGGCTAATCTGAAATCTTCGTGT3200.41269022440030956No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATTGCTTCTTGTG3140.4049522826928037No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGTCATTGTCGCTGTC3020.3894763992777921No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT2550.3288625225689967No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG2500.3224142378127418No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC2460.31725561000773794No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA2460.31725561000773794No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA2430.313386639153985No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2410.3108073252514831No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGTCGTGGAGACAGCCGCTCAC2390.3082280113489812No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGGGTTACCACCTTGCAAGA2350.3030693835439773No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA2300.29662109878772247No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTGGAGACAGCCGCTCACC2290.29533144183647153No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2170.27985555842145987No Hit
CATAGACCCAAGACCCCAGCCTTTACCCACTGACGCTATACCACACTACA2140.275986587567707No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA2030.2618003611039464No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1920.24761413464018572No Hit
CATAGACACAACAGAGAGAACGGGCTCACTGACGATCATTGTTCACTGCA1880.24245550683518183No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC1880.24245550683518183No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGCCCTCTCTGCTGTTCCTT1830.236007222078927No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATGGGCCCCAGTGTGAATACTTCT1730.22311065256641732No Hit
CATAGACCCAAGACCCCAGCCTTTACCAACCCCTGCAGTCTTTGGAGGAA1730.22311065256641732No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAGGGGTAAGGCGTACTGGTCTA1700.21924168171266442No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG1590.2050554552489038No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC1570.20247614134640185No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC1500.1934485426876451No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT1420.18313128707763734No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGATGCTGAAGTGATGGGCTAGA1420.18313128707763734No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAGAGATCCCACCATTTGCCA1390.17926231622388444No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1310.1689450606138767No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTGTGCACCTTCATTGTTGCTCTA1280.1650760897601238No Hit
CATAGATCAAGGAAAACACCAGCCCATCTCAGAGATCCCACCATTTGCCA1260.16249677585762187No Hit
CATAGAGTCCAACTATTCCAGCACCAGTTGGGACATGCCAGGAATCAATG1260.16249677585762187No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACAAATGATTTTTCCACTA1250.1612071189063709No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAGAGTGCA1210.15604849110136704No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTCCACGCTGTCCTTCTC1210.15604849110136704No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1200.15475883415011607No Hit
CATAGATCATGGGACTTCAGCATGGCTGTTCTTCCTTTTCTGCCTTCATC1170.15088986329636317No Hit
CATAGAGCTTGGGTGCGAACATCAAGGGGTAAGGCGTACTGGTCTATGAG1110.14315192158885737No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGAGGAGCTGAGTCATGGG1100.1418622646376064No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACATAGACTGTGTGCTT1090.14057260768635543No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGTCATTGTCGCTGTCCCAT1090.14057260768635543No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGTTTCCCCACTCAAATACC1090.14057260768635543No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGATCATTGTTCACTGC1050.13541397988135156No Hit
CATAGAGTCCAACTATTCCAGCACCATGGTTCTACAAAGGATTCTGGGCC1040.1341243229301006No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGACATGGTTCTACACAT1000.12896569512509673No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT970.12509672427134383No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCAAGTAATAACCAGGCC960.12380706732009286No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGACATGGTTCTACACA880.11348981171008513No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC870.11220015475883414No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC860.11091049780758318No Hit
CATAGATCATGGGACTTCAGCATGGCACTGACGACATGGTTCTACACATA850.10962084085633221No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTGTTCTTCCTTTTCTGCCTTCAT840.10833118390508126No Hit
CATAGACTCATTGCACTTTCCACAACTGTAATTGAACAACTATTTGAATA800.10317255610007739No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC800.10317255610007739No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGTAGCAGCATAATTTCCCATGT800.10317255610007739No Hit
CATAGACCAGCAGACACTCCCATCATTCAGTCATTTATTTTAAAGGACTG800.10317255610007739No Hit
CATAGATCATGGGACTTCAGCATGGCGACATGGTTCTACACATAGAGTGT780.10059324219757544No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)