FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807129

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807129
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences180785
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2102811.631495975882956No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA133397.378377630887519No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG119466.6078491025250985No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG100375.551898664159085No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC100365.551345520922643No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG97545.39535912824626No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG72093.9876095915037197No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC46772.5870509168349143No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA43882.4271925215034433No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA43262.3928976408440965No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT33591.8580081312055758No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT27341.512293608429903No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC27021.4945930248637884No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT25571.4143872555798325No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT25471.4088558232154218No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC20161.11513676466521No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA19751.0924578919711259No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA18010.9962109688303786No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA16100.890560610670133No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG15900.8794977459413116No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG15470.8557125867743453No Hit
CATAGAAAAAACAGTTGGCCAGGCATAGGCTAATCTGAAATCTTCGTGTT14840.8208645628785575No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA14740.8153331305141466No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG14380.7954199740022679No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA14170.7838039660370053No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG14020.7755068174903891No Hit
CATAGATCATGGGACTTCAGCATGGCATGGTTCTACAAAGGATTCTGGGC12490.6908759023149045No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA12210.6753878916945544No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC12050.6665375999114971No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG11340.6272644301241806No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT11070.6123295627402716No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT10060.5564620958597228No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGCTATACCACACTACA8540.47238432392067925No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT8070.44638659180794865No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT7840.4336642973698039No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC7500.41485742733080727No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGGGTGGAAGGGTAAGAGA6910.3822219763807838No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT6270.3468208092485549No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT6160.3407362336477031No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG5540.30644135298835634No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGAGACAGCCGCTCACCTCTATGA5200.2876344829493597No Hit
CATAGAGTCCAACTATTCCAGCACCAAGGGGTAAGGCGTACTGGTCTATG4540.2511270293442487No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG4520.2500207428713665No Hit
CATAGATCATGGGACTTCAGCATGGCTACACTGGCTCAGGTATGTCTTTA4450.246148740216279No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA4150.2295544431230467No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC4140.22900129988660564No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC3860.2135132892662555No Hit
CATAGACACAACAGAGAGAACGGGCTCCGAGGTCAGGAAGGAACCTGCTC3810.21074757308405012No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA3590.19857842188234645No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGACATTGCTTCTTG3350.1853029842077606No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG3340.18474984097131952No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA3080.17036811682385156No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC3020.16704925740520507No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGTGAAATTAACTGGGTGTGGTGG2800.1548801062035014No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT2630.1454766711840031No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT2570.14215781176535663No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCATCAGGAACCATGGG2570.14215781176535663No Hit
CATAGAGCTTGGGTGCGAACATCAACACACTGACGATCATTGTTCACTGC2450.13552009292806372No Hit
CATAGAGAAGACTCCCTCAACCCACCTGTCCCAACTGTCTCTGAAAAATT2430.13441380645518156No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA2410.1333075199822994No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGGAGACAGCCGCTCACCT2200.1216915120170368No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA2150.11892579583483143No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1940.10730978786956884No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAGTGCGTG1890.10454407168736343No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG1870.1034377852144813No Hit
CATAGATCATGGGACTTCAGCATGGCAGCTCACTCACCTTCCCCACACCC1810.10011892579583483No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)