FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807131

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807131
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145342
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC96316.626439707723851No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC71884.945576639925142No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA69534.783889034140166No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA69204.761183966093765No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA43883.0190860178062775No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT42562.9282657456206738No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA41382.8470779265456647No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA35142.417745730759175No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA28461.9581401109108172No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27181.8700719681853835No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT22711.5625215010114073No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA20981.4434919018590635No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG19291.327214432166889No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC19011.3079495259457004No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA17151.1799755060478045No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA17151.1799755060478045No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG16811.1565824056363612No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC15621.0747065541963094No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG14330.9859503791058332No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC13300.9150830455064606No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT13020.895818139285272No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG12070.830455064606239No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG11280.7761005077678854No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC10860.7472031484361024No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT10200.7017930123433006No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT10070.6928485915977487No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT10040.6907844945026215No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA9820.6756477824716876No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9260.6371179700293101No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT9260.6371179700293101No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG8760.6027163517771876No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT8510.5855155426511263No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC8390.5772591542706169No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT7750.5332250829079No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG6370.4382766165320417No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT6350.4369005518019568No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6050.41625958085068326No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT6020.41419548375555587No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA6010.4135074513905134No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC5850.4024989335498341No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA5850.4024989335498341No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG5840.40181090118479174No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA5830.40112286881974923No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA5630.38736222151890026No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA5560.3825459949636031No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5540.3811699302335182No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT5430.3736015742180512No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA5390.3708494447578814No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGCACCCGTAATCCCTCCCTT5230.35984092691720215No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA4940.3398879883309711No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4900.3371358588708013No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC4810.33094356758541926No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4750.3268153733951645No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC4620.3178709526496126No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA4580.31511882318944284No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4440.3054863700788485No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC4440.3054863700788485No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT4420.3041103053487636No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA4420.3041103053487636No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4320.2972299816983391No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT4260.2931017875080844No Hit
CATAGATCATGAATGACTCCCACTCTGGTGAAAAGTAGGGGACAGTTCTA4260.2931017875080844No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT4180.2875975285877448No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4180.2875975285877448No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG4060.2793411402072354No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT3990.27452491365193815No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT3770.25938820162100423No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG3760.2587001692559618No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC3580.24631558668519768No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT3460.23805919830468827No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3400.23393100411443357No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3380.23255493938434865No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT3350.23049084228922131No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3340.22980280992417884No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA3310.22773871282905145No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGCATCGGCCGCACTGAAATTGT3220.2215464215436694No Hit
CATAGATTTGGCACTCACATACACGCACACTGACGACATGGTTCTACACA3120.2146660978932449No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG3120.2146660978932449No Hit
CATAGATCTGGGAGGTGAAGAGGACAGAACAATGGGCACACTTAACACCT3000.20640970951273546No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTGGTGAAAAGTAGGGGACAG2980.20503364478265057No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA2890.1988413534972685No Hit
CATAGAGTCATTCCAAACTGTGCACTTTGGGGGAAGAGAAACAGAATCTA2870.1974652887671836No Hit
CATAGACCCACTTACACACACAGGTTTGGTGAAAAGTAGGGGACAGTTCT2830.1947131593070138No Hit
CATAGAGACCCCCAAGTAGCCTAACTGAGGTTCTTCAACACAGCTATTCT2810.1933370945769289No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2780.19127299748180154No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTTGGTGAAAAGTAGGGGACAGTTC2780.19127299748180154No Hit
CATAGACCCCCATGCAACCACATCTATGGGAGGAACAGGGAGATGTTCTA2780.19127299748180154No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2760.18989693275171662No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG2760.18989693275171662No Hit
CATAGAGACCCCCAAGTAGCCTAACTGACACTGACGACATGGTTCTACAC2750.18920890038667418No Hit
CATAGATGCACCAGAAGCCACCTACCTGGCAAAAGGGTAAGAGTTCTATG2660.1830166091012921No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTACCG2610.17957644727607985No Hit
CATAGACCCCCATGCAACCACATCTATGCCAAGTATATGACACATTACAC2560.1761362854508676No Hit
CATAGATCATGAATGACTCCCACTCTGCTACCGTAAGGATGACTTATGGA2510.17269612362565537No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT2480.170632026530528No Hit
CATAGATCTGGGAGGTGAAGAGGACAGATCTGGGAGGAACAGGGAGATGT2420.1665038323402733No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG2420.1665038323402733No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC2360.16237563815001857No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTTGATCTAGCTTCGGAATG2340.16099957341993368No Hit
CATAGACCATGTAATACCATCGTGAGCAGAAGGATGACTTATGGAATCTG2330.1603115410548912No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT2310.1589354763248063No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2170.149303023214212No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT2160.14861499084916954No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC2160.14861499084916954No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2110.14517482902395729No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2040.14035860246866014No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGATGACTTATGGAATCT1930.13279024645319315No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT1920.1321022140881507No Hit
CATAGAATTGCCTACTTTGGGACCCACCCGTAATCCCTCCCTTTTCTATG1920.1321022140881507No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT1910.13141418172310826No Hit
CATAGAATTGCCTACTTTGGGACCCACAGCCCAGTTTTCCTTCTCTATGA1890.13003811699302334No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGGCTCTCTTCCGCCTTTATCCT1870.12866205226293845No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC1840.12659795516781108No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACCCGTAATCCCTCCCTTTTC1840.12659795516781108No Hit
CATAGAACTTGTGCTTTTGGTGTCACAGCCCAGTTTTCCTTCTCTATGAG1820.1252218904377262No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGACTTGGTGAAAAGTAGGGG1780.1224697609775564No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1740.11971763151738658No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTTAGGAGTTCTGGCCCCTGTCTAT1740.11971763151738658No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC1730.11902959915234414No Hit
CATAGAATTGCCTACTTTGGGACCCACCCCTTTACCTACCTTCTCAGCTC1720.11834156678730168No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC1710.11765353442225923No Hit
CATAGATGTCCCCATTCATCCTGCAACACATAGATGTCCCCCTTCATTTT1690.11627746969217433No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG1620.11146124313687715No Hit
CATAGATGCACCAGAAGCCACCTACCTGGGCCCATAATACACTTTTCTAT1590.1093971460417498No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1570.1080210813116649No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC1550.10664501658157999No Hit
CATAGATGCACCAGAAGCCACCTACCGTAACAATGGGCACACTTAACACC1550.10664501658157999No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTACAAGCACATTATTATTGG1460.10045272529619793No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)