FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807132

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807132
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145342
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG102347.041323223844449No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG71294.904982730387637No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT71134.893974212546958No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT69594.78801722833042No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT42952.9550990078573296No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT42072.894552159733594No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT40832.8092361464683298No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT35462.4397627664405332No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT34802.3943526303477314No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT28051.929930783944077No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT22371.5391284005999641No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT20991.4441799342241057No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG19451.3382229500075682No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG19401.3347827881823562No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG16961.1669028911119979No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT16921.164150761651828No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT16901.1627746969217432No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG14340.9866384114708755No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13160.9054505923958662No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC13120.9026984629356964No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT12500.8600404563030646No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG11900.8187585144005175No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG11270.775412475402843No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9890.6804640090269846No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT9880.6797759766619422No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT9840.6770238472017724No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGCAGTTAGGCTACTTGGG9750.6708315559163903No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC9290.6391820671244376No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA9240.6357419052992253No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG8490.5841394779210414No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT8420.5793232513657443No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC8220.5655626040648952No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT7820.5380413094631972No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG6410.4410287459922115No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6160.42382793686615017No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC6080.41832367794581055No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT6040.41557154848564076No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT5990.41213138666042853No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC5990.41213138666042853No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT5950.40937925720025875No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG5890.40525106301000396No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA5820.40043483645470684No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT5680.39080238334411255No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG5640.3880502538839427No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT5460.3756656713131786No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5440.3742896065830936No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC5370.3694733800277965No Hit
CATAGAAAAGGGAGGGATTACGGGTGCTCATGCTGAAGGATAGTTGGGTG5090.35020847380660786No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4930.33919995596592867No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4870.33507176177567394No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC4850.33369569704558905No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG4810.33094356758541926No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC4630.31855898501465507No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA4600.31649488791952773No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC4580.31511882318944284No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT4540.312366693729273No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT4380.3013581758885938No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4380.3013581758885938No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4320.2972299816983391No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAGTGGGAGTCATTCATGATCTA4300.2958539169682542No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT4270.29378981987312686No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4230.291037690412957No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT4090.2814052373023627No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC4030.277277043112108No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG3850.26489246054134385No Hit
CATAGATGAGGGATGTAGGCTGTACACTACGGTTGCAGGATGAATGGGGA3600.24769165141528257No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA3570.24562755432015523No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3420.23530706884451846No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3400.23393100411443357No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3340.22980280992417884No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT3330.2291147775591364No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT3330.2291147775591364No Hit
CATAGACAATTTCAGTGCGGCCGATGCCCAGTTAGGCTACTTGGGGGTCT3270.22498658336888167No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGACATCTATGTGTAGAACCATGTC3190.21948232444854204No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC3100.21329003316315998No Hit
CATAGAACTGTCCCCTACTTTTCACCACATAGAACTTTCCCACCGCCCTT3090.21260200079811753No Hit
CATAGACACTTGACCATGCCCTTGTTCTATGTGTAGAACCATGTCGTCAG3010.20709774187777794No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTCTGTCCTCTTCACCTCCCAGAT2990.20572167714769302No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2970.20434561241760812No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2930.2015934829574383No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2920.20090545059239587No Hit
CATAGAACTGTCCCCTACTTTTCACCAAACCTGTGTGTGTAAGTGGGTCT2900.19952938586231098No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGTGCACAGTTTGGAATGACTCTA2890.1988413534972685No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2830.1947131593070138No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGAACTTTCCCACCGCCCTTTTC2820.19402512694197135No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTTAGGCTACTTGGGGGTCTCT2790.19196102984684402No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2790.19196102984684402No Hit
CATAGAACATCTCCCTGTTCCTCCCATAGATGTGGTTGCATGGGGGTCTA2780.19127299748180154No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT2730.1878328356565893No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA2640.18164054437120722No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGCATAGATGTGGTTGCATGG2630.18095251200616477No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAGGTGGCTTCTGGTGCATCTATG2630.18095251200616477No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2570.17682431781591007No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTAGCAGAGTGGGAGT2530.17407218835574026No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTGTCCTCTTCACCTCCCAGA2510.17269612362565537No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAACACTGCTCACGATGGTATT2410.16581579997523085No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG2400.16512776761018838No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTCTGCTCACGATGGTATTAC2330.1603115410548912No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT2280.15687137922967895No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG2240.15411924976950916No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCCAAGTAAGTCT2220.15274318503942425No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2150.1479269584841271No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT2150.1479269584841271No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2110.14517482902395729No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT2080.14311073192882995No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTTGCAGGATGAATGG1960.13485434354832052No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1950.13416631118327804No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTCCCAAAGTAGGCAATTCTATG1910.13141418172310826No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT1890.13003811699302334No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGTCTGCCAAGTAAGTCTACAAA1870.12866205226293845No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCCCAGTTAGGCTACTTGGGGGTC1860.127974019897896No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCCCAAAGTAGGCAATTCTATGT1830.12590992280276864No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTAGAATCTTGAACTCAGGAGTC1810.12453385807268375No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA1800.12384582570764129No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA1790.12315779334259884No Hit
CATAGAGAAGGAAAACTGGGCTGTGACACCAAAAGCACAAGTTCTATGTG1740.11971763151738658No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG1740.11971763151738658No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTGGGTCCCAAAGTAGGCAATTC1720.11834156678730168No Hit
CATAGACAGGGGCCAGAACTCCTAAGGAGTTGACAAACGACAGCTTCTAT1700.11696550205721679No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1670.11490140496208942No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGACATCTATGTGTTGCAGGATGAA1630.1121492755019196No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1600.11008517840679224No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTAGGTGGCTTCTGGTGCATCTAT1560.10733304894662245No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC1560.10733304894662245No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG1560.10733304894662245No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTACGGTAGGTGGCTTCTGGTGCA1530.1052689518514951No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACATAGAACTTTCCCACCGC1470.10114075766124038No Hit
CATAGAACTAGTTCCAGCACCACCAGCATAGATGTGGTTGCATGGGGGTC1460.10045272529619793No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)