FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807135

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807135
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107728
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2885926.78876429526214No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTCTCTGACTGTGTTA1477313.713240754492798No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG46014.270941630773801No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG35383.284197237487004No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC24242.250111391653052No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT23472.178635080944601No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA15141.4053913560077231No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA13671.2689365810188624No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT12691.1779667310262885No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT9900.918981137680083No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT7580.703623941779296No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA7490.6952695678003862No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGCCATCACAGTTCAT7060.6553542254567057No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT7020.651641170354968No Hit
CATAGAAGCATGGAAGACAAACAGCAACACTGCCATCACAGTTCATTGTA6140.5699539581167384No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT5520.512401604039804No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC5270.48919500965394325No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT5120.47527105302242684No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGCTGTCATGATTATCACCTTCTA5000.4641318877172137No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTGACTGTGTTAATTTAAAAGA4960.460418832615476No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA4780.4437100846576563No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG4750.44092529333135305No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA4600.42700133669983664No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA4540.4214317540472301No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGGAGGATGATCAATG4470.4149339076191891No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT4190.3889425219070251No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC4140.38430120302985293No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTGCCATCACAGTTCATTG4050.3759468290509431No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT4040.3750185652755087No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCTACA3990.3703772463983365No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT3930.36480766374573No Hit
CATAGATGAAAGACAAGCAGGGAAGCTACCGTATGGTCTGTTCGGCCACT3860.35830981731768896No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG3530.32767711272835287No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT3520.3267488489529185No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT3480.32303579385118075No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC3470.32210753007574633No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3380.3137531560968365No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTGTGTTTGCTTTGTGGAAGA3210.2979726719144512No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC2980.2766226050794594No Hit
CATAGACACATGTAGGATGGGGTGGTATATTTTCTAAAGCCTGGGATCTA2930.2719812862022873No Hit
CATAGACTTCAGCCCTCACAAGCCTTCAGAGACTTGGCTGTCATGATTAT2780.2580573295707708No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2760.256200802019902No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2630.2441333729392544No Hit
CATAGAGCATTACCCTCAAACTATCCCTATCCTCTTGCCTCCGTCCCTCT2350.21814198722709044No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2250.20885934947274618No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT2170.20143323926927076No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2110.1958636566166642No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGAGGTCAAGGTGGGAGGATGGTCT2030.18843754641318877No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1900.1763701173325412No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACATGGAGGATGATCAATGC1890.17544185355710679No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCTGCACTTCTTGCTGCTGCCAT1850.1717287984553691No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGATTGCTTTGCCAAAGA1830.16987227090450022No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTAGGTCTGTTCGGCCA1810.16801574335363137No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCGAAGA1750.1624461607010248No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAAAGG1730.16058963315015592No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1580.14666567651863954No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1560.1448091489677707No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1500.1392395663151641No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCACTGCCATCACAGTTCATTGTAT1450.13459824743799198No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1410.13088519233625426No Hit
CATAGAGCTATCTGGCAAAAACCCATCATTTACTCCTACCGCGACAAAGA1400.12995692856081983No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCCCACTCACTCTCTCTTGCTCCTA1390.1290286647853854No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1390.1290286647853854No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1380.128100401009951No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA1350.12531560968364772No Hit
CATAGACACATGTAGGATGGGGTGGCAGACAGGATGCGCAGATGGTCTAT1340.12438734590821326No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC1320.12253081835734442No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTCTCTGACTGTGTTAATTTAA1310.12160255458191No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1280.11881776325560671No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1280.11881776325560671No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA1270.11788949948017227No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1270.11788949948017227No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGATTTCTTTGTTGAAGA1260.11696123570473786No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1240.115104708153869No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1190.11046338927669687No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1160.10767859795039358No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1150.10675033417495916No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACGCCTATAATTCCAGC1100.10210901529778703No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCTTGTAATCGCAGC1080.10025248774691815No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)