FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences203480
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA178588.776292510320424No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG94524.645173972872027No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC85304.192058187536859No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG73063.590524867308827No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA70893.48388047965402No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA55852.744741497935915No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG55082.706899941026145No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG54402.6734814232356987No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA42082.0680165126793786No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT41982.063102024769019No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA41872.0576960880676234No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG39701.9510517004128172No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC38631.898466679771968No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT34931.7166306270886573No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT34271.684195006880283No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA28441.39768036170631No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC27441.348535482602713No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC24281.1932376646353449No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA23831.1711224690387263No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG23661.1627678395911147No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG22081.0851189306074307No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA17890.8792018871633577No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA17860.8777275407902496No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT17410.8556123451936308No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT16620.8167878907017889No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT15660.7696088067623353No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT15580.7656772164340475No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA14130.6944171417338313No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG13350.6560841360330254No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT12560.6172596815411834No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG11380.5592687241989385No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA11030.5420680165126794No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA10550.5184784745429526No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA7870.3867701985453116No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC7840.3852958521722037No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT7810.38382150579909574No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCAAGGGGTAAGGCGTACT7750.3808728130528799No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA7230.35531747591900925No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG7160.3518773343817574No Hit
CATAGACCCAAGACCCCAGCCTTTACCGTACAAGGGGTAAGGCGTACTGG6950.34155690977000197No Hit
CATAGACCAGCAGACACTCCCATCATTTGCAAGGGGTAAGGCGTACTGGT6400.31452722626302343No Hit
CATAGAAAAAACAGTTGGCCAGGCATCACGCTATACCACACTACACACTC6320.3105956359347356No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG6270.3081383919795557No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTCCGCTATGTAGTTCAGGTGT6140.3017495576960881No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA5780.284057401218793No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5730.28160015726361315No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA5450.26783959111460587No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGATCATTGTTCACTGC5340.26243365441321015No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA5280.2594849616669943No Hit
CATAGACCTCCGACAGTTTTTATGCACCGTACAAGGGGTAAGGCGTACTG5240.2575191665028504No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGCTATACCACACTACA5230.25702771771181443No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGTCATTGTCGCTGTCCC5150.25309612738352666No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT5140.25260467859249064No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGTCATTGTCGCTGTCCCAT5050.24818163947316688No Hit
CATAGACCGCTTCCCAATTTTTGTAACATGAGGAGCTGAGTCATGGGGTC4970.2442500491448791No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCCTTCCCCACACCCTCTT4960.2437586003538431No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA4800.23589541969726754No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT4700.23098093178690782No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC4670.22950658541379987No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGCCCTCTCTGCTGTTCC4660.2290151366227639No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGATCATTGTTCACTGC4660.2290151366227639No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAGTGAAGCAGAGCTTCCCA4650.22852368783172794No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA4520.2221348535482603No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCAAGGGGTAAGGCGTACT4510.22164340475722427No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC4490.22066050717515234No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGATCATTGTTCACTGC4490.22066050717515234No Hit
CATAGATGAGGACACCATAAAGACAACAAGGGGTAAGGCGTACTGGTCTA4440.2182032632199725No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT4330.21279732651857675No Hit
CATAGATGGCCAAGATACGAGCACATACACTGGCTCAGGTATGTCTTTAT4240.20837428739925298No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGCCCTCTCTGCTGTTCCTTC4100.20149400432474934No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA4070.20001965795164145No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4070.20001965795164145No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGCCCTCTCTGCTGTTCCTT4010.19707096520542558No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG3980.1955966188323177No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGCAGAAGTAGGAAGTATT3880.19068213092195793No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTTCTCAAACTGCTGGGGTTGC3840.18871633575781405No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT3840.18871633575781405No Hit
CATAGACACAACAGAGAGAACGGGCTACCGTACCCTGCAGTCTTTGGAGG3750.18429329663849026No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC3640.17888735993709456No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG3620.1779044623550226No Hit
CATAGACACAACAGAGAGAACGGGCTACACTCTGAGGAGAATTCAAGCTG3610.17741301356398664No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT3360.16512679378808728No Hit
CATAGATGAGGACACCATAAAGACAACAACACTGACGATCATTGTTCACT3270.16070375466876352No Hit
CATAGACACAACAGAGAGAACGGGCTGTCATTGTCGCTGTCCCATCTATG3260.16021230587772753No Hit
CATAGACGGATTATTCTCTCCATGGTCTGTTTCCCCACTCAAATACCATC3230.1587379595046196No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGGACATGCCAGGAATCAATG3200.15726361313151171No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGGTGGAAGGGTAAGAGAG3170.15578926675840377No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACTGTGTGCTTGAACCAG3110.15284057401218795No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTACAGGCTAATCTGAAATCTT3100.15234912522115196No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3040.1494004324749361No Hit
CATAGACGTGACTAAAAGCATGTTGGTCCCAACTGTCTCTGAAAAATTTC3000.14743463731079223No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGAGATCCCACCATTTGC2990.14694318851975624No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGTACGCTATACCACACTACAC2980.14645173972872028No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGGAGACAGCCGCTCACCTC2970.14596029093768428No Hit
CATAGACATTTAATCCTCACAATGACCCATGTCACGCTATACCACACTAC2950.14497739335561233No Hit
CATAGACAGTGCCTTTGTGCGTGTTAACACTGTCATTGTCGCTGTCCCAT2940.14448594456457636No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT2910.14301159819146847No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGTCATTGTCGCTGTCCCATCT2900.14252014940043248No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGCCCTCTCTGCTGTTC2900.14252014940043248No Hit
CATAGAAGGACAAAGACATTTAGGACCCAGGTGATAGGCTTAGAGGGCTT2860.14055435423628856No Hit
CATAGACCCAAGACCCCAGCCTTTACTACGGTGGAAGGGTAAGAGAGGGT2720.13367407116178495No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTGGTGGAAGGGTAAGAGA2680.13170827599764104No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC2650.13023392962453312No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGATCATTGTTCACTGCA2590.12728523687831728No Hit
CATAGACCAGCAGACACTCCCATCATACACTGTCATTGTCGCTGTCCCAT2560.12581089050520936No Hit
CATAGAAGGACAAAGACATTTAGGACCCACCCACAGCCAGGAAAGAATCT2530.12433654413210145No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGTCATTGTCGCTGTCCCA2470.12138785138588559No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGGCTCAGGTATGTCT2470.12138785138588559No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTGTGCACCTTCATTGTTGCTCT2430.1194220562217417No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2410.11843915863966974No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT2390.1174562610575978No Hit
CATAGACCCAGATGCTGTCCCACTAACACTGACGACATGGCTCAGGTATG2390.1174562610575978No Hit
CATAGATGGCCAAGATACGAGCACATAGAGATCCCACCATTTGCCATCTA2360.11598191468448987No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGAGAGCTTCACAACCTTGAAAGG2350.11549046589345391No Hit
CATAGACATTTAATCCTCACAATGACCCATGAGGAGCTGAGTCATGGGGT2310.11352467072931001No Hit
CATAGACCAGCAGACACTCCCATCATACACTGCCCTCTCTGCTGTTCCTT2300.11303322193827402No Hit
CATAGACCTCCGACAGTTTTTATGCACAGGCTGCAGAAGTAGGAAGTATT2280.11205032435620209No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2250.11057597798309415No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGATCATTGTTCACTGCA2180.10713583644584235No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACAAATGAGAAACCTGGA2180.10713583644584235No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2140.10517004128169843No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT2130.10467859249066247No Hit
CATAGAAGGACAAAGACATTTAGGACCCATGGCTCAGGTATGTCTTTATT2130.10467859249066247No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2120.10418714369962649No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGTCATTGTCGCTGTCCCAT2120.10418714369962649No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTCTGCCCTCTCTGCTGTT2110.10369569490859053No Hit
CATAGACCCAAGACCCCAGCCTTTACTACCGTAGGTCTACCAGTTATTAG2070.10172989974444663No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)