FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807139

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807139
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences183211
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC120486.576024365349243No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA104635.710901638002086No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC103915.671602687611552No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA89484.883986223534613No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT64903.5423637227022393No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA55213.013465348696312No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT50692.7667552712446306No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT40632.217661603288012No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC39752.1696295528106937No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA36031.9665849757929381No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA29941.6341813537396772No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA26131.426224407923105No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA25911.4142163953037754No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA25741.4049374764615663No Hit
CATAGAATTCCCCAATGTCCTGTGCATTGACAAGAGCCATTCTTTCTCCC25611.397841832641053No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG25471.3902003700651162No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG21791.189339068069057No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC18631.0168603413550497No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT17780.9704657471440034No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT16770.915338052846172No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC16700.9115173215582034No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT15640.8536605334832515No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA15630.8531147147278274No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA14670.8007161142071164No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT14000.7641462575937034No Hit
CATAGACCATGTAATACCATCGTGAGCAGGAAAATGTCAGTGGGCCATCT13820.7543215199960701No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTTTTTGAGATGGAGTCTCACT13300.7259389447140182No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC12840.7008312819645108No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT12170.6642614253510979No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG12030.6566199627751609No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT10930.5965798996785127No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA10870.5933049871459684No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT10730.5856635245700313No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA10530.5747471494615498No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10460.5709264181735813No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT10240.5589184055542517No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA9830.5365398365818647No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA9800.5349023803155925No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9590.5234401864516869No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG9060.494511792414211No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC8730.47649977348521655No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT8710.4754081359743684No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG8640.4715874046863998No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTGAAGGTTTTCCGGCTTGAGGT8040.4388382793609554No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA7960.43447172931756284No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA7650.4175513478994165No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT7620.4159138916331443No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC7510.4099098853234795No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA7450.406634972790935No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA7010.3826189475522758No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG6960.37988985377515544No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT6960.37988985377515544No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6950.37934403501973135No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6720.36679020364497766No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGATGATCTAGCTTCGGAATGTTT6400.34932400347140724No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC6380.3482323659605591No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC6040.32967452827614063No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC5830.31821233441223506No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA5820.317666515656811No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT5760.31439160312426656No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5300.2892839403747592No Hit
CATAGATGCACCAGAAGCCACCTACCTGGGCCCATAATACACTTTTCTAT5170.2821882965542462No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA4880.26635955264694805No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCATCGGCCGCACTGAAATTGTC4790.2614471838481314No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4760.25980972758185916No Hit
CATAGACCCCCATGCAACCACATCTATGCCCCTTTACCTACCTTCTCAGC4710.2570806338047388No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA4610.25162244625049807No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA4440.24234352740828882No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG4440.24234352740828882No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG4380.23906861487574438No Hit
CATAGATGCACCAGAAGCCACCTACCTTCCAACTCTATAGATTATGCTCT4220.23033551478895917No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG4180.2281522397672629No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAATCACTTGATCATCCATTGT4120.22487732723471843No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4000.21832750216962954No Hit
CATAGACAGAACACCACACCCCTGTCCACAGCCCAGTTTTCCTTCTCTAT3970.2166900459033573No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG3860.2106860395936925No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3830.20904858332742032No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT3750.2046820332840277No Hit
CATAGATTTGGCACTCACATACACGCCATAGATCTGGGAGGAACAGGGAG3480.18994492688757772No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT3390.18503255808876104No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG3380.18448673933333698No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3350.18284928306706474No Hit
CATAGACCATGTAATACCATCGTGAGCAGAATGGCCCAGCATGAGAAGAA3260.1779369142682481No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC3200.17466200173570362No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA3100.1692038141814629No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA2960.16156235160552587No Hit
CATAGACCATGTAATACCATCGTGAGCAGTACCATCGGCCGCACTGAAAT2930.15992489533925366No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGACCACAGCCCAGTTTTCCT2890.15774162031755734No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT2840.15501252654043698No Hit
CATAGAATTGCCTACTTTGGGACCCACCCCTTTACCTACCTTCTCAGCTC2820.15392088902958884No Hit
CATAGATTTGGCACTCACATACACGCCTGTTTCAGGGATTCATGTAAATT2750.15010015774162033No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCGAACAAGGGCATGG2740.14955433898619624No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2680.1462794264536518No Hit
CATAGATGCACCAGAAGCCACCTACCGTATCCATCAGAGCATCACCCCTT2620.14300451392110736No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG2580.14082123889941106No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT2570.140275420143987No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC2520.13754632636686662No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2350.12826740752465737No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTACCG2350.12826740752465737No Hit
CATAGACAGTCCTGCCGTGTACATGTAGAAACCAGAATTATGAATTTCTT2300.125538313747537No Hit
CATAGAAAAGTCACCATGCAGCCCTGAAAGTCACCACAGCCCAGTTTTCC2290.1249924949921129No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA2240.12226340121499256No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATTGTCCTTGCACACCATGG2200.12008012619329625No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGCCCCCTTCATTTTGCTGGAAC2010.10970956984023884No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACAATGGGCACACT1960.10698047606311847No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC1960.10698047606311847No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1880.10261392601972588No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1850.10097646975345366No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)