FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences183211
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG126626.911157081179624No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT104935.727276200664807No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG103765.6634154062801905No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT91404.988783424576035No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT63893.487236028404408No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT62923.4342916091282727No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT53802.9365049041815174No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG40632.217661603288012No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT40082.187641571739688No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT35291.9261943878915568No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT29551.6128944222781383No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT26411.441507333074979No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG25831.409849845260383No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT25521.3929294638422365No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT25511.3923836450868123No Hit
CATAGAGAAGGAAAACTGGGCTGTGGAGAAAGGAGACTGACACAGTGTCA24301.3263395756804996No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG22041.2029845369546588No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC18310.9993941411814793No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT17650.9633701033234904No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT16600.9060591340039627No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT15700.856935446015796No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT15410.8411067021084979No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT14830.8094492142939016No Hit
CATAGATGGCCCACTGACATTTTCCTGCTCACGATGGTATTACATGGTCT13960.7619629825720071No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTACTGGGGTATGTGGCACTCCAG13580.7412218698658923No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC12930.7057436507633275No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT12230.6675363378836423No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG12150.6631697878402498No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA11580.6320581187810775No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG10820.590575893368848No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC10810.5900300746134238No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT10780.5883926183471516No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT10720.5851177058146072No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT10620.5796595182603664No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT10480.5720180556844294No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT10390.5671056868856128No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT9860.5381772928481368No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT9610.524531823962535No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG8960.48905360485997024No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT8930.487416148593698No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG8630.4710415859309758No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC8580.4683124921538554No Hit
CATAGAACCTCAAGCCGGAAAACCTTCAGCATTCTTTCTCCAGACCTTCA8170.44593392318146835No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA8080.4410215543826517No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT7640.4170055291439924No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC7450.406634972790935No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC7390.40336006025839066No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT7350.4011767852366943No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA7110.38807713510651654No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT7110.38807713510651654No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC7010.3826189475522758No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG6980.38098149128600356No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6670.3640611098678573No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC6370.3476865472051351No Hit
CATAGATGAAAACATTCCGAAGCTAGATCATCAGGAGTTGACAAACGACA6320.3449574534280147No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG5990.32694543449902025No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA5850.31930397192308324No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT5680.31002505308087397No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5680.31002505308087397No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC5290.2887381216193351No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTAGGTGGCTTCTGGTGCATCTAT4930.2690886464240684No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA4880.26635955264694805No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTAGAATCTTGAACTCAGGAGTC4770.26035554633728325No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC4720.25762645256016287No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC4600.251076627495074No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCATAGATGTGGTTGCATGGGGG4560.24889335247337768No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG4450.24288934616371288No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC4410.2407060711420166No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG4400.2401602523865925No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAGGTAGGTGGCTTCTGGTG4280.23361042732150364No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC4170.22760642101183878No Hit
CATAGAGCAGACAATGGATGATCAAGTGATTCTGCTTTTACAAACTCAAG4060.22160241470217398No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3960.21614422714793324No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG3890.21232349585996474No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACAGGGGTGTGGTGTTCTGTCTAT3830.20904858332742032No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT3720.2030445770177555No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGGCGTGTATGTGAGTGC3560.1943114769309703No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT3440.18776165186588142No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC3430.18721583311045736No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG3340.18230346431164068No Hit
CATAGAGGCCATTCTTCTCATGCTGGGCCATTCTGCTCACGATGGTATTA3280.17902855177909624No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG3190.17411618298027956No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3160.17247872671400735No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT2980.16265398911637402No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2970.16210817036094993No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT2890.15774162031755734No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTGGGTCCCAAAGTAGGCAATTC2860.15610416405128513No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGAAATTCAAGATTACACAGA2840.15501252654043698No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTCATAGACACTTGAAAGCTCCCTG2810.15337507027416475No Hit
CATAGACACTTGACCATGCCCTTGTTCGGTCTCATAGACACTTGAAAGCT2800.1528292515187407No Hit
CATAGACAATTTCAGTGCGGCCGATGGTACTGCTCACGATGGTATTACAT2780.15173761400789254No Hit
CATAGACGTGTGGTTGGGATGTCAGCCGGCAGCCCCTAGAAGATTGGATC2680.1462794264536518No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2650.1446419701873796No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG2590.14136705765483512No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGGTGGCTTCTGGTGCAT2560.1397296013885629No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT2480.13536305134517032No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA2460.13427141383432217No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2350.12826740752465737No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT2230.12171758245956847No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGACTGTCTATGTGTAGAA2220.12117176370414441No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACTTTCAGGGCTGCATGGTGAC2200.12008012619329625No Hit
CATAGATCCATGGTGTGCAAGGACAATGGTGTGCACAGGACATTGGGGAA2170.11844266992702404No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC2000.10916375108481477No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGCATGTCTCTCCCTCTCTCACACA1980.10807211357396662No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTCTATGTGTAGAACCATGT1970.10752629481854256No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1900.10370556353057403No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG1890.10315974477514997No Hit
CATAGAACTGACCATACACTTGCCCTTCTGGGTAGAATCTTGAACTCAGG1890.10315974477514997No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAAACCTGTGTGTGT1880.10261392601972588No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1860.10152228850887775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)