FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97860
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1080111.037195994277539No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG74607.623135090946249No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG61636.297772327815246No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG54645.583486613529532No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC41094.198855507868384No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA39864.07316574698549No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG32943.366033108522379No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG32923.363989372573063No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT31843.2536276313100347No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA20902.1357040670345393No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT20882.133660331085224No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA19852.0284079296954833No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT19441.9865113427345187No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA13611.3907623135090947No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC13111.3396689147762109No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC12251.251788268955651No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA11251.1496014714898835No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG11211.1455139995912527No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT10741.0974862047823422No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG8040.82158185162477No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA7070.7224606580829757No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA6460.6601267116288575No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA5600.5722460658082975No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG5590.5712241978336399No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT5390.5507868383404865No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT5360.5477212344165134No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC5210.5323932147966483No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG5190.5303494788473329No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATAGAGTGTCTGTTTCCCCA4720.48232168403842224No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGCTGAAGTGATGGGCTAGATCT4620.4721030042918455No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA4620.4721030042918455No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA4550.46494992846924177No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4220.4312282853055386No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA3810.3893316983445739No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT3600.3678724708767627No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3500.35765379113018597No Hit
CATAGATGTGTAGCCTGGGTCTGACAAGGGGTAAGGCGTACTGGTCTATG3470.35458818720621293No Hit
CATAGACCAGCAGACACTCCCATCATTCAGTCCCAACTGTCTCTGAAAAA3360.34334763948497854No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3170.32393214796648273No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGACATGGTTCTACACAT3060.31269160024524834No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2970.3034947884733292No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG2970.3034947884733292No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA2640.269773145309626No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2620.26772940936031064No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC2600.2656856734109953No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2510.2564888616390762No Hit
CATAGATCAAGGAAAACACCAGCCCATGGCTCAGGTATGTCTTTATTAGC2500.25546699366441855No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT2480.2534232577151032No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG2340.23911710606989578No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA2330.2380952380952381No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC2190.22378908645003065No Hit
CATAGATGGCCAAGATACGAGCACATCATGGTTCTACAAAGGATTCTGGG2040.20846106683016555No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATGGTTCTACACATAGAAATGAT2000.20437359493153487No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG1940.1982423870835888No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1930.19722051910893112No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1800.18393623543838136No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1780.181892499489066No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1650.16860821581851623No Hit
CATAGACTCATTGCACTTTCCACAACTGTTTCTACACATAGAAATGATGC1600.16349887594522788No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGTTCTACACATAGACCAACAT1500.15328019619865113No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCACTGACGACATGGTTCTACACAT1490.15225832822399346No Hit
CATAGATGTGTAGCCTGGGTCTGACACACTGACGACATGGTTCTACACAT1390.1420396484774167No Hit
CATAGAAATGATGCTGAAGGGCCTGCTCTACACATAGAAATGATGCTGAA1320.134886572654813No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1300.13284283670549765No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1290.13182096873083998No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA1250.12773349683220928No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGACATGGTTCTACA1230.12568976088289394No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGACATGGTTCTACACATA1170.11955855303494789No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG1160.1185366850602902No Hit
CATAGAAATGATGCTGAAGGGCCTGCTAGAAATGATGCTGAAGTGATGGG1090.11138360923768648No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC1090.11138360923768648No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1070.10933987328837114No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA1070.10933987328837114No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGAAATCTACAAAGGATTCTG1050.1072961373390558No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGGTTCTACACATAGAAATGATG1050.1072961373390558No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1030.10525240138974044No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC1010.1032086654404251No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)