FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81215
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1079213.288185679985224No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG63867.863079480391553No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG56826.996244536107862No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG47175.808040386628086No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG33154.081758295881302No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC32694.025118512590039No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG29413.6212522317305913No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT24633.0326910053561535No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA22942.824601366742597No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA17642.172012559256295No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT16572.040263498122268No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC15931.9614603213692052No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT14891.833405159145478No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG10181.253463030228406No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT10131.247306532044573No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT6650.8188142584497937No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT6480.7978821646247615No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT6360.7831065689835621No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG6330.7794126700732623No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT6300.7757187711629625No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC5750.7079972911407991No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT5600.6895277965893No Hit
CATAGACCCCATGACTCAGCTCCTCATGTGCTCGTATCTTGGCCATCTAT5550.683371298405467No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACGCCTC5220.642738410392169No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT4920.6057994212891707No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT4860.598411623468571No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGTGTCTGCTGGTCTATGTGTA4660.573785630733239No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG4290.5282275441728745No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT4260.5245336452625746No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA3890.47897555870221015No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT3880.4777442590654436No Hit
CATAGATTCAGAGAAGGACAGCGTGGGACACTGTCAGACCCAGGCTACAC3870.476512959428677No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT3610.44449916887274515No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC3250.40017238194914734No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGAGCATGCCTTTGAT2820.34722649756818325No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGCCCGTTCTCTCTGTTGTGT2680.3299883026534507No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTGGT2640.3250631041063843No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCTGAATGATGGGAGTGTCTGCTG2390.2942806131872191No Hit
CATAGATGGGACAGCGACAATGACAGTGTGGGCTGGTGTTTTCCTTGATC2330.2868928153666195No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG2220.2733485193621868No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAGTTGTGGAAAGTGCAATGAGTC2200.2708859200886536No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACTGTATGCTTTATTCTCACGT2130.2622668226312873No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTACC2100.2585729237209875No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGGGTCCTAAATGTCTTTGTCCT2090.2573416240842209No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2040.25118512590038783No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC1960.241334728806255No Hit
CATAGAGCAACAATGAAGGTGCACAACAACAACAAAACTCGTGACTTCTA1960.241334728806255No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT1910.235178230622422No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT1860.22902173243858895No Hit
CATAGATGGGACAGCGACAATGACAGTGTGTCTGAGAAAAGATGCAGTAC1820.2240965338915225No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG1770.21794003570768947No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGGTGGGTTGAGGGAGTCTTCTC1600.19700794188265716No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCAACATGCTTTTAGTCACGTCTA1590.19577664224589053No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT1560.19208274333559072No Hit
CATAGATGGGACAGCGACAATGACAGTGTACAGTTGTGGAAAGTGCAATG1540.18962014406205752No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGACTGTTAAT1470.18100104660469127No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTAAAGGCTGGGGTCTTGGGTCTAT1440.17730714769439143No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1420.17484454842085823No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTACT1370.16868805023702518No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGTGCTCGTATCTTG1350.16622545096349198No Hit
CATAGAATCTGGTTCAAGCACACAGTGTAGCAGGCCCTTCAGCATCATTT1340.16499415132672535No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG1310.16130025241642554No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1270.1563750538693591No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACAGTTGTGGAAAGTGCAATGA1260.1551437542325925No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT1240.1526811549590593No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC1230.1514498553222927No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCACAGTTGTGGAAAGTGCAATG1230.1514498553222927No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGCCCATTGTAGATTTCTTTC1230.1514498553222927No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1210.14898725604875945No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTCCTAAATGTCTTTGTCCTTCT1180.14529335713845964No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGAGACAGTTGTGGAAAGTGCA1170.14406205750169304No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAATG1160.14283075786492644No Hit
CATAGACCAGTTACCACAAGAAGCAATGTACCCTGGGAGAAGAAATGTTG1150.14159945822815984No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTTACAAAAATTGGG1090.1342116604075602No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTGACGAATG1060.13051776149726038No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1040.12805516222372715No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACCTCCTCCCCATTG990.12189866403989412No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT940.11574216585606108No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGCTGGTGTTTTCCTTGATCTA930.11451086621929447No Hit
CATAGATGGCAAATGGTGGGATCTCTACACTGTCATTGTGGGTTTTAACT920.11327956658252786No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGAGATATGATGGGAGTGTCTG890.10958566767222803No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA870.10712306839869483No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTATGGGTC830.10219786985162839No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)