FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54143
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2770351.166355761594296No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA17433.219252719649816No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC9721.7952459228339768No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT9351.7269083722734242No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC6021.1118704172284506No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC5681.0490737491457807No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG4910.9068577655467928No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC4320.7978870768151007No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT4060.7498660953401178No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG3620.668599818997839No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA3580.6612119756939956No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGCAAAGAGCTAAA3080.5688639343959514No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA3030.559629130266147No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGTGGAGGCTGC2980.5503943261363426No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACCAAGTACTTCAGTTGA2970.5485473653103817No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG2870.5300777570507729No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA2640.4875976580536727No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC2500.4617402064902203No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2180.40263746005947215No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGGCAACAGAACAAC1900.35092255693256746No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT1850.34168775280276303No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA1740.32137118371719336No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1710.3158303012393107No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT1680.31028941876142807No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1670.3084424579354672No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1670.3084424579354672No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG1440.26596235893836695No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1440.26596235893836695No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1410.26042147646048425No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1340.24749275067875812No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAAACACTGACGACATGGTGGG1320.24379882902683636No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1320.24379882902683636No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC1310.24195186820087544No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1300.24010490737491458No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACCAATACTTCAGTTGAC1290.2382579465489537No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG1270.2345640248970319No Hit
CATAGAACAAGGCCAGAATTACCCTGGACTTCAGTTGACTATAAGAAACA1220.22532922076722753No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT1210.22348225994126666No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1210.22348225994126666No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1190.2197883382893449No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1180.217941377463384No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1160.21424745581146223No Hit
CATAGACAGCTGACCAGAAAATGTTTCACATATGCACCATGGAATACTAT1090.20131873002973608No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1000.18469608259608813No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG980.18100216094416638No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTAGACCTGCG980.18100216094416638No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG930.17176735681436198No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG880.16253255268455755No Hit
CATAGACAGGAGGAGGAAGAAGAGGACACTGACGACATGGTTCTACACAT880.16253255268455755No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC840.15514470938071404No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACGTATACACCATGGAATACT820.15145078772879225No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA790.14590990525090963No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT780.14406294442494874No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC770.14221598359898785No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC720.13298117946918347No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCCGAGAGGTGGAGCTTGC720.13298117946918347No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC720.13298117946918347No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACATATACACCATGGAATACT670.12374637533937906No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTCAGACATGTTTCCTAGTTT660.12189941451341818No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG650.12005245368745729No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTTGACCTGCG650.12005245368745729No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACATACACACCATGGAATACT630.11635853203553553No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG610.11266461038361376No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATGGTTCTACACATAGAACCCAA590.108970688731692No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA580.10712372790573112No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGTGAAGAGCGAAA580.10712372790573112No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG560.10342980625380935No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGGGTGGTCTTACTCTT560.10342980625380935No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC560.10342980625380935No Hit
CATAGAACAATGTAATAAGCATCGGAGGATCACTTGAGTTCAGGAGTTTG560.10342980625380935No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGTACCTGCG560.10342980625380935No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA550.10158284542784847No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCAAAGTGCTGTGATTACAGGCATG550.10158284542784847No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)