FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807171

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807171
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166730
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1729610.373658009956218No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG91165.467522341510226No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC85225.1112577220656155No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG83865.029688718287051No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG70324.217597313021052No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG61043.661008816649673No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA49262.954477298626522No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA40992.458465783002459No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT38452.3061236730042585No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT38182.2899298266658668No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA37812.267738259461405No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG35912.1537815630060577No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG30401.8233071432855514No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT21941.315899958015954No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG19431.1653571642775746No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT18421.1047801835302584No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG17111.0262100401847298No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC15740.9440412643195586No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA15570.9338451388472381No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC15450.926647873807953No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA15340.9200503808552749No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA14140.8480777304624243No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC13680.8204882144784981No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA13010.7803034846758231No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGCTATACCACACTA12890.7731062196365381No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA12840.7701073592035027No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG12700.7617105499910034No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG10710.6423559047561926No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT10400.6237629700713729No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG10290.6171654771186948No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA10240.6141666166856594No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC10080.604570263299946No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT8730.523601031607989No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGCCCTCTCTGCTGTTCCTT8400.5038085527499551No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA8150.48881425058477773No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG8070.4840160738919211No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG7720.46302405086067294No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT7560.45342769747495953No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA7340.44023271156960353No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA6940.41624182810532No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG6530.3916511725544293No Hit
CATAGAAGCCATGAACACAGGATTGAAAAAAGATTGATAGACTACAGGAA6270.376057098302645No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT6000.35986325196425356No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5760.34546872188568345No Hit
CATAGAAGGACAAAGACATTTAGGACCCATGGGCAAGGGGTAAGGCGTAC5450.3268757872008637No Hit
CATAGAGTCCAACTATTCCAGCACCATGATGCTGAAGTGATGGGCTAGAT5350.32087806633479277No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAAGGGGTAAGGCGTACTGGTCT5290.3172794338151502No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG4820.28909014574461706No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4810.28849037365800995No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA4670.2800935644455107No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC4550.2728962994062256No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCACATAGAGATCCCACCATT4500.2698974389731902No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGGAGACAGCCGCTCACCT4230.2537035926347988No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACTGACGACATGGTTCTACAC4130.24770587176872788No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGCCCTCTCTGCTGTTCCT4060.24350746716247823No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGGAGACAGCCGCTCACCTC3960.2375097462964074No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT3900.23391111377676485No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG3870.23211179751694358No Hit
CATAGAAGGACAAAGACATTTAGGACCCCTGCAGTCTTTGGAGGAATCTA3470.20812091405266No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT3390.20332273735980325No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC3330.19972410484016073No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGAGAGCTTCACAACCTTGAAAGG3240.19432615606069695No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGCCCTCTCTGCT3230.19372638397408984No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGATCATTGT3120.18712889102141186No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCACACTGACGCTATACCACACT3110.18652911893480478No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3060.18353025850176932No Hit
CATAGAAATGATGCTGAAGGGCCTGGAAATGATGCTGAAGTGATGGGCTA3000.17993162598212678No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAAACTGCTGGGGTTGCTCTAT2840.17033527259641337No Hit
CATAGACCTCCGACAGTTTTTATGCACTGGTTCTACACATAGAGTGTCTG2720.1631380075571283No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT2700.1619384633839141No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTCCCAACTGTCTCTGAAAAA2680.16073891921069994No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGGTGGAAGGGTAAGAGA2660.15953937503748575No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA2660.15953937503748575No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACCAACCACGCTGTCCTTC2660.15953937503748575No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2620.1571402866910574No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG2620.1571402866910574No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2580.15474119834462904No Hit
CATAGATGAGGACACCATAAAGACAACAAAATCTACAAAGGATTCTGGGC2460.14754393330534396No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC2450.14694416121873688No Hit
CATAGAAAGGTGCAATCAAGCCAGTTATCAAGGGGTAAGGCGTACTGGTC2360.1415462124392731No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGTTTCCCCACTCAAATACC2340.1403466682660589No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA2050.1229532777544533No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA1990.11935464523481078No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTCTGCCTCTAAGTAAACTGAAT1970.11815510106159659No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1900.11395669645534696No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC1900.11395669645534696No Hit
CATAGAAAAAACAGTTGGCCAGGCATGACGACATGGTTCTACACATAGAA1860.11155760810891863No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1810.10855874767588317No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA1790.10735920350266898No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGACATGGTTCTACACATA1730.10376057098302645No Hit
CATAGAAAAAACAGTTGGCCAGGCATTCAAGACCAGCTTGACCAACATGG1730.10376057098302645No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1720.10316079889641937No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCATCTAAGAGATCCCACCAT1700.10196125472320518No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGTGGCTCACATCTCTAATCCCAG1680.100761710549991No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)