FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807175

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807175
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60379
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC55059.117408370459929No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA36366.0219612779277565No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC35905.9457758492191No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA34845.770218122194803No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA32195.331323804634062No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT27534.5595322877159274No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA22133.665181602875172No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG17652.9232017754517297No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT16302.699614104241541No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTACAAGCAATGGGGAAAGGAT15832.6217724705609564No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA13752.277281836400073No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG11221.8582619785024597No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTTATGCAGAC10351.7141721459447823No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT8481.4044618161943723No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACTGATACAGGAAGGCC8151.3498070521207706No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG7751.2835588532436775No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG7571.2537471637489856No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC7411.2272478841981485No Hit
CATAGAGCTGGCTTCCTAACTTCCAACTTGCTTCCTTCTGCTGGCTATTC7221.195779989731529No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA7031.16431209526491No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT6261.036784312426506No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTACAAGCAATGGGGA6181.0235346726510874No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGTCTCTGCTACCGTACAATGGGC6181.0235346726510874No Hit
CATAGATCATGGGACTTCAGCATGGCTCAATGGGCAAGCAATGACAGTCT6131.0152536477914507No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT5570.9225061693635205No Hit
CATAGACCTTTGGGTTCATATCATCTGGACACTGGAGACAGCCGCTCACC5460.9042879146723198No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA5140.8512893555706453No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA4790.7933221815531891No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC4700.7784163368058431No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC4510.7469484423392239No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCACAAGCAATGGGGAAAGG4400.7287301876480233No Hit
CATAGATCATGGGACTTCAGCATGGCCTTCCTAACCATGGGCATATCTAT3420.5664221003991454No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT3210.5316417959886716No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA3010.498517696550125No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAC3010.498517696550125No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG2770.4587687772238692No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT2680.4438629324765233No Hit
CATAGATCCCATCCAATAATAATGAGCAACACTGTACCATGTTTTCATCC2320.38423955348713956No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTATGCTTCCTTCTGCTGG2270.37595852862750295No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA2240.37098991371172096No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA2090.3461468391328111No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT2010.3328971993573925No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA1950.3229599695258285No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG1880.3113665347223372No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACTGATACAGGAAGGCC1730.28652346014342733No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT1690.27989864025571803No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG1640.2716176153960814No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGGAGACAGCCGCTCAC1610.26664900048029944No Hit
CATAGATCCTCTCATTGTCCAGTTTGGTACTGTAGCAGAATTACCTCTGG1490.24677454081717154No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGATCCCCAGAAATGT1480.24511833584524423No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACGACATGGTTCTACAC1250.20702562149091572No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC1210.2004008016032064No Hit
CATAGATCATGGGACTTCAGCATGGCTTCCTAACCATGGGCATATCTATG1190.19708839165935177No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1090.1805263419400785No Hit
CATAGATCATGGGACTTCAGCATGGCTCTAACATAGATCATGGAGACAGC960.1589956773050233No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAAGCAATGGGGAAAGGATTC950.15733947233309595No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT890.147402242501532No Hit
CATAGATCATGGGACTTCAGCATGGACAAGCAATGGGGAAAGGATTCTAT810.1341526027261134No Hit
CATAGAGCTGGCTTCCTAACTTCCAACACATAGAGCTGCCTTCCTAACCA810.1341526027261134No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA780.1291839878103314No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC770.12752778283840407No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTACACATGGCTACA700.1159343480349128No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATAGATCATGGGACTTCAG700.1159343480349128No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGCAATGGGGAAAGGATTCTAT660.1093095281472035No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA620.10268470825949419No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCAATGGGGAAAGGATTCTATGAG620.10268470825949419No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)