FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807178

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807178
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41126
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA479311.654427855857609No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG27756.747556290424549No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA27146.599231629626027No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA23865.801682633856927No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT22445.456402275932501No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA22065.364003306910471No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT17344.216310849584205No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT14723.5792442736954726No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT13903.3798570247531976No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG10942.6601176871079124No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG8091.9671254194426884No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT7921.9257890385644116No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA7321.7798959295822596No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG6451.5683509215581384No Hit
CATAGAATCCTTTCCCCATTGCTTGTGACTTCGTCTCAGCCCAAAATCTC5171.2571122890628799No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT4691.1403978018771581No Hit
CATAGACATGCTAACATTTCTGGGGATAAGGCTGGCAAAGTTCCAATCTA3870.9410105529348831No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT3180.7732334776054077No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAGACAGCCGGCCATGCTGAAGTCCC3020.7343286485435004No Hit
CATAGACATGCTAACATTTCTGGGGATACATTACTGGGGACTGTGACTCT2580.6273403686232554No Hit
CATAGAAGTTCTGATCCACATTCACGTATATTGGAACTTTGCCCCAAAAG2490.6054564022759324No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTCGTCAGTGTGCCATGCTGAAGTC2390.5811408841122404No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT2360.5738462286631327No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT2220.5398045032339639No Hit
CATAGAAGCAGGATGAAAACATGGTACATGAGCAGGAATTAGACTCTTGA2080.5057627778047951No Hit
CATAGACATGCTAACATTTCTGGGGATACGGTAGCAGAGATTGGTCTCAT1970.47901570782473374No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG1960.4765841560083645No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGCTTGGTTCATAAATTCAACAGG1950.4741526041919953No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT1740.423090016048242No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA1680.40850070515002673No Hit
CATAGATGACTTGGGGGAAAATGGTATAGGAGCAGGAATTAGACTCTTGA1660.40363760151728834No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCATGGGCCATGCTGAAGTC1560.3793220833535963No Hit
CATAGATGACTTGGGGGAAAATGGTATACGGGAGCAGGAATTAGACTCTT1470.3574381170062734No Hit
CATAGAATCCTTTCCCCATTGCTTGTCATAGAGCAGGAATTAGACTCTTG1440.3501434615571658No Hit
CATAGAGGTGAGCGGCTGTCTCCATGAGACCAACTCAGATGGGATCCTCT1430.3477119097407966No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG1370.33312259884258133No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTCTGTTTTCTATGTGTA1340.3258279433934737No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT1340.3258279433934737No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTATGAGACCAACTCAGATGGGATC1330.32339639157710454No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA1260.30637552886252006No Hit
CATAGAATCCTTTCCCCATTGCTTGCCATGCTGAAGTCCCATGATCTATG1190.2893546661479356No Hit
CATAGAATAGCCAGCAGAAGGAAGCATACGGAGCAGGAATTAGACTCTTG1180.28692311433156636No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG1120.2723338034333512No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTAGAT1100.2674706998006128No Hit
CATAGACATGCTAACATTTCTGGGGATACACTGACGCCATGCTGAAGTCC1080.2626075961678743No Hit
CATAGAATCCTTTCCCCATTGCTTGTTACGGGAGCAGGAATTAGACTCTT970.23586052618781306No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTAACTGGGGACTGTGACTC910.22127121528959784No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA890.21640811165685941No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA890.21640811165685941No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA830.20181880075864417No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTAGCCATGCTGAAGTCCCA800.19452414530953654No Hit
CATAGATTGCATAGCCATGTGTAGCCATGTGTAGCCATGTGTAGCCATGT770.18722948986042892No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAAGAGCAGGAATTAGACTCTTG710.17264017896221368No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTCGTCTCAGCCCAAAATCT700.17020862714584448No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTATGGAAGTACACAAAAAG680.16534552351310608No Hit
CATAGACATGCTAACATTTCTGGGGATAACGGTAGCAGAGATTGGTCTCA580.14103000534941398No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTGGTT570.13859845353304479No Hit
CATAGATTGCATAGCCATGCTGAAGTCCCATGATCTATGTGTAGAACCAT570.13859845353304479No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT560.1361669017166756No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATGCTGAAGTCCCATGATCTAT550.1337353499003064No Hit
CATAGATGCATCAGCAACTCACAGATTGCATAGCCATGCTGAAGTCCCAT550.1337353499003064No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGGCCAT530.12887224626756796No Hit
CATAGAATAGCCAGCAGAAGGAAGCACCAGCTTCCACATGATGGACATCT520.12644069445119877No Hit
CATAGAATCCTTTCCCCATTGCTTGTCATGCTGAAGTCCCATGATCTATG510.12400914263482954No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCCAAACTGGACAATGAGAG500.12157759081846034No Hit
CATAGACATGCTAACATTTCTGGGGATAGACATGCTAACATTACTGGGGA490.11914603900209113No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGATGGGATCTATGTGTAG480.11671448718572192No Hit
CATAGAGGTGAGCGGCTGTCTCCAACCCCTTAAGAAAATTTAATTGTCTA470.11428293536935273No Hit
CATAGAGTTCAAATGGCCAATCAGGTGCAGAGACTTGGTCTCATAAATTC450.10941983173661432No Hit
CATAGATTGCATAGCCATGTGTAGCCTACGGGAGCAGGAATTAGACTCTT440.10698827992024511No Hit
CATAGACCCTTACCAATAACACAATCAACACTTATACGCCTCCCTGTCTA440.10698827992024511No Hit
CATAGAGTTCAAATGGCCAATCAGGTTGTCTGGGTGGTTTCTGTCTATGT420.10212517628750668No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)