FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14839
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA10837.298335467349553No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA9476.381831659815351No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT9346.294224678212817No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA9166.172922703686233No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT6504.380349080126693No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA5533.7266662174000946No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG4653.1336343419367885No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC2601.7521396320506772No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2561.725183637711436No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGCTTCCT2381.603881663184851No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA2231.5027966844126963No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT2231.5027966844126963No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2231.5027966844126963No Hit
CATAGATGAAAGCCTGTTGAATTTATGATCTATCCAGGAATTTTATTTTA2211.4893186872430757No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG2191.475840690073455No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGTTCTACACATAG2071.3949727070557316No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC2061.388233708470921No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG1911.2871487296987667No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC1891.2736707325291463No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTGATTGTGTTATTGGTAAGG1861.2534537367747152No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCTTTCCCTCACTCTCTCCA1661.1186737650785092No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1591.0715007749848373No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTATCCCCAGA1551.044544780645596No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1501.0108497877215445No Hit
CATAGATGCCCTTTTTGTGTACTTCCAATAGACTTCCTTTCCCTCACTCT1240.8356358245164768No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1230.8288968259316666No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCACAAGCAATGGGGAAAGG1230.8288968259316666No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1220.8221578273468563No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG1200.8086798301772357No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTATGTGACAAGCAATGGG1150.7749848372531841No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA1060.7143338499898915No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA830.5593368825392546No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTTCTTTCAAAAGTCTGGTCT780.5256418896152032No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA710.4784688995215311No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG690.4649909023519105No Hit
CATAGATGCCCTTTTTGTGTACTTCCAATGCCCTTTTTGTGTGCTTCTTT660.4447739065974796No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGAATCCTTTCCCTCACTCTCT650.4380349080126693No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACGACATGGTTCTACACATAGAT650.4380349080126693No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT600.40433991508861783No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT580.3908619179189972No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA540.36390592357975604No Hit
CATAGATTGGAACTTTGCCAGCCTTAATCCTTTCCCTCACTCTCTCCATC540.36390592357975604No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATAATCTGTGAGTTGCTGATG530.35716692499494573No Hit
CCTGATTGGCCATTTGAACTCTATGAGACCAAGTCTCTGCTACCGTAGAA520.3504279264101354No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGTACCATGTTTTCATCCTGC510.3436889278253251No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG510.3436889278253251No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCACAAGCA500.33694992924051487No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG500.33694992924051487No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA470.31673293348608395No Hit
CATAGATGAAAGCCTGTTGAATTTATGAATCCTTTCCCTCACTCTCTCCA420.28303794056203246No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGTCTCTGCTACCGTAACCTGATT420.28303794056203246No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCAATGGGGAAAGGATTCTATGAG410.27629894197722216No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG390.2628209448076016No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA390.2628209448076016No Hit
CATAGAGATGTTTGATAAGCAGGGTGATCTATCCAGGAATTTTATTTTAA380.2560819462227913No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT360.24260394905317068No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA360.24260394905317068No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT360.24260394905317068No Hit
CATAGATGAAAGCCTGTTGAATTTATGACTGATACAGGAAGGCCTTTCTA350.2358649504683604No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT340.2291259518835501No Hit
CATAGATCATGGGACTTCAGCATGGCTATTCTGCTTCCTTCTGCTGGCTA330.2223869532987398No Hit
CATAGACAGAAACCACCCAGACAACCACACTGACTGATACAGGAAGGCCT320.2156479547139295No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGATGCCCTTTTTGTGTGCTTC320.2156479547139295No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC310.2089089561291192No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGTATCCCCAGAAATG300.20216995754430891No Hit
CATAGATGTCCATCATGTGGAAGCTGGCTATTCTATGAGACCAAGTCTCT300.20216995754430891No Hit
CATAGACAGAAACCACCCAGACAACCCCTTAAGAAAATTTAATTATCCCC300.20216995754430891No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT300.20216995754430891No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC300.20216995754430891No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAACAATGGGCAAGCAATGACAGT300.20216995754430891No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG280.18869196037468833No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA270.18195296178987802No Hit
CATAGACCTGGGCTTAGGGGCTATACAAGCAATGGGGAAAGGATTCTATG260.1752139632050677No Hit
CATAGATGTATACAAGCTGTCACAGACAACAATGGGCAAGCAATGACAGT230.15499696745063682No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA220.14825796886582654No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA220.14825796886582654No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA210.14151897028101623No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGTTCTACACATAGAGCTGCTTC210.14151897028101623No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA200.13477997169620592No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAACATGTCTATGAGAC200.13477997169620592No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA200.13477997169620592No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATGAGAC190.12804097311139565No Hit
CATAGAGGATCCCATCTGAGTTGGTCACATAGAGGATCCCACCTGATTGG180.12130197452658534No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGGCATGGTTCTACA180.12130197452658534No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG170.11456297594177504No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTTGGAGACAGCCGCTCA170.11456297594177504No Hit
CATAGATGTCCATCATGTGGAAGCTGCTTCCTTCTGCTGGCTATTCTATG170.11456297594177504No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGACAAGCAATGGGGAAAGG160.10782397735696475No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAGTGTACCATTTTCCCCCAAG150.10108497877215446No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAAATCCCCAGAAATGTTAGCAT150.10108497877215446No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC150.10108497877215446No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA150.10108497877215446No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)