FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807186

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807186
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14839
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG12438.3765752409192No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA9476.381831659815351No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT9056.098793719253319No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA8956.031403733405217No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT6424.32643709144821No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT5513.713188220230474No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA4743.1942853292000803No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT2551.7184446391266257No Hit
CATAGAATAGCCAGCAGAAGGAAGCATGTCGTCAGTGTATGCAAGACTAG2421.630837657524092No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTAGAACCATGTCGTCAGTGTCAT2351.5836646674304198No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT2291.5432306759215582No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCATAAATTCAACAGGCTTT2261.523013680167127No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2231.5027966844126963No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG2171.4623626929038345No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATCACTTATACGCCTCCCTGTCTA2101.4151897028101623No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC2081.4017117056405417No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG1911.2871487296987667No Hit
CATAGACCCTTACCAATAACACAATCAACACTGGGGACTGTGACTCTGTT1851.246714738189905No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATGGAAGTACAC1841.2399757396050946No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATACTGGGGACTGTGACTCTGTTT1701.1456297594177505No Hit
CATAGACATGCTAACATTTCTGGGGATACATGCTAACATTACTGGGGACT1470.9906327919671137No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA1420.9569377990430622No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAAGTCTATTGGAAGTACACAAAAA1350.9097648089493902No Hit
CATAGAATCCTTTCCCCATTGCTTGTGGTCTCATAAATTCAACAGGCTTT1260.8491138216860974No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG1220.8221578273468563No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT1210.815418828762046No Hit
CATAGAATCCTTTCCCCATTGCTTGTCACATAGATTGGAACTTTGCCCCA1070.7210728485747018No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG1070.7210728485747018No Hit
CATAGACCCTGGATTAGCATGAGGAAGTACACAAAAAGGGCATCTATGTG1070.7210728485747018No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA830.5593368825392546No Hit
CATAGACCAGACTTTTGAAAGAAGCACATCACTTATACGCCTCCCTGTCT780.5256418896152032No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGGAAGTACACAAAAAGG730.49194689669115166No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA680.4582519037671002No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG670.45151290518228987No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATTGGAAGTACA640.431295909427859No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAATAGAGCAGGAATTAGACTCT580.3908619179189972No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT570.3841229193341869No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTAGAACCATGTCGTCAGTGTAGA560.37738392074937666No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTAAGGCTGGCAAAGTTCCAATC550.37064492216456635No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG550.37064492216456635No Hit
CATAGATGCATCAGCAACTCACAGATTATTGGAACTTTGCCCCAAAAGAG540.36390592357975604No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT540.36390592357975604No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA530.35716692499494573No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT520.3504279264101354No Hit
CATAGAAGCAGGATGAAAACATGGTACAGTGTAAGGCTGGCAAAGTTCCA500.33694992924051487No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTATGCAAGACTAGGCAATTT500.33694992924051487No Hit
CATAGACATGCTAACATTTCTGGGGATTTGGTCTCATAGACATGCTAACA490.33021093065570456No Hit
CATAGACTGTCATTGCTTGCCCATTGGTCTCATAGACTGTCATTGCTTGC480.32347193207089425No Hit
CATAGACTGTCATTGCTTGCCCATTGGACTTGGTCTCATAGACTGTCATT480.32347193207089425No Hit
CATAGAATCCTTTCCCCATTGCTTGTGACTTGGTCTCATAGAGCAGGAAT470.31673293348608395No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCATAAATTCAACAGGCTTTCA460.30999393490127364No Hit
CATAGACATGCTAACATTTCTGGGGATATTACTGGGGACTGTGACTCTGT440.2965159377316531No Hit
CATAGAGTTCAAATGGCCAATCAGGTTACGGTAGCAGAGACTTCGTCTCA430.28977693914684277No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT400.26955994339241185No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT390.2628209448076016No Hit
CATAGAATCCTTTCCCCATTGCTTGGAAGTTAGGAAGCCAGCTCTATGTG390.2628209448076016No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA390.2628209448076016No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCACCCTGCTTATCAAACAT370.24934294763798098No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA370.24934294763798098No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACATAGAGCAGGAATTAGACTC360.24260394905317068No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA360.24260394905317068No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT340.2291259518835501No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATAAATTCAACAGGCTTTCATCTA330.2223869532987398No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGGTTGTCTGGGTGGTTTCT320.2156479547139295No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT300.20216995754430891No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGAATAGCCATGCTGAAGTCCCATG300.20216995754430891No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTGGGGACTGTGACTCTG290.1954309589594986No Hit
CATAGACATGCTAACATTTCTGGGGATACTAACATTACTGGGGACTGTGA290.1954309589594986No Hit
CATAGACATGCTAACATTTCTGGGGATAATTAAATTTTCTTAAGGGGTTG290.1954309589594986No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGAAGTTAGGAAGCCAGCT270.18195296178987802No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGGAAGT260.1752139632050677No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA240.16173596603544713No Hit
CATAGAATCCTTTCCCCATTGCTTGTATAGCCCCTAAGCCCAGGTCTATG240.16173596603544713No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG220.14825796886582654No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGCTCTATGTGTAGAACCATTGGAA220.14825796886582654No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGTCTGTGACAGCTTGTATACAT210.14151897028101623No Hit
CATAGACATGCTAACATTTCTGGGGATACAGAGACTTGGTCTCATAGACA190.12804097311139565No Hit
CATAGACATGCTAACATTTCTGGGGATAGACATGCTAACATTACTGGGGA180.12130197452658534No Hit
CATAGAGCAGGAATTAGACTCTTGACATCTATGTGTAGAACCATGTCGTC180.12130197452658534No Hit
CATAGATATGCCCATGGTTAGGAAGGCTGGCAAAGTTCCAATCTATGTGT180.12130197452658534No Hit
CATAGACATGCTAACATTTCTGGGGATACATTACTGGGGACTGTGACTCT180.12130197452658534No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGCTTCCACATGATGGACATCTATG170.11456297594177504No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGGATCCTCTATGTGACCAACTCA170.11456297594177504No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGCCGTCAGTGT160.10782397735696475No Hit
CATAGACATGCTAACATTTCTGGGGATTTACTGGGGACTGTGACTCTGTT160.10782397735696475No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATTGCTCATTATTATTGGATGG150.10108497877215446No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA150.10108497877215446No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT150.10108497877215446No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATTCAACTTTCCTTGGCTCTAT150.10108497877215446No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)