FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences561480
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG8669715.440799316093182No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA546719.736945216214291No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC372626.636389541924912No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC220953.9351357127591364No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC181183.2268290945358693No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG174953.11587233739403No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA149052.65459143691672No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT134462.394742466338961No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG132772.3646434423309826No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA121522.1642801168340813No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA106441.8957042103013466No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG104451.860262164280117No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG71511.2735983472251906No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA69381.2356628909311107No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG64971.1571204673363253No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT56941.0141055781149817No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC56831.0121464700434566No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC56601.008050153166631No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT42760.761558737621999No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCACTTC34090.6071454014390539No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC33120.5898696302628766No Hit
CATAGACTTGATGCCCAGGAAACCTCCACTGACGACATGGTGGGTGCCTG33090.5893353280615516No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT32890.5857733133860512No Hit
CATAGACCACACCCAAACACCACGTACACTGACGCATGGTGGGTGCCTGA31640.5635107216641733No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTACCAGCAGAATCAGGGTT30930.5508655695661466No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT30620.5453444468191209No Hit
CATAGAGAAGAGAAGGCGACAATGGCCACATAGAGAGGTCTTGGCAGGCT30260.5389328204032201No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC29500.5253971646363184No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA27420.4883522120111135No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTTTTCTCTTCTTGGCATCT26160.46591151955546056No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC25460.453444468191209No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGACTCTT24720.44026501389185724No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT22080.39324642017525113No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC21990.3916435135712759No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC21620.38505378642160004No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC20590.36670941084277264No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGGACATGGATGAAG18610.33144546555531806No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT18440.3284177530811427No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGTTACAACCAATGCTCTTTCATCT17910.3189784141910665No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGCAGTCTCAAACGTTGTGTCTATG16970.3022369452162143No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCACTGACGACATGGTGGGTG15120.269288309467835No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA14650.2609175749804089No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT13950.2484505236161573No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA13380.238298781790981No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC13090.2331338605115053No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT12460.22191351428367886No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGGGACATGGATGAAGCTG12360.22013250694592862No Hit
CATAGAACAAGGCCAGAATTACCCTGTCTCATAGAAAGGGACATGGATGA11890.21176177245850253No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGGACATGGATGAAGCTGG11700.20837785851677706No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG11260.20054142623067606No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGACATGGATGAAGCTGGAT11150.1985823181591508No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT11020.1962670086200755No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG10320.1837999572558239No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT10310.18362185652204885No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT10140.18059414404787347No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC9980.1777445323074731No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCCATGAGACC9910.17649782717104795No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG9890.1761416257034979No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT9770.17400441689819762No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG8530.15191992591009473No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC8520.15174182517631973No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGAACCCAAAGAGTGAGCCCTTGTC8280.14746740756571916No Hit
CATAGAGAAGAGAAGGCGACAATGGCACACTGACGACATGGTGGGTGCCT8240.14675500463061908No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTAGAACCCAAAGAGTGAGCCCTTG8180.14568640022796894No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG8050.14337109068889362No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGCAGTCTCAAACGTTGTGTCTAT8030.1430148892213436No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTCAGACATGTTTCC7950.1415900833511434No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG7940.1414119826173684No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG7480.13321934886371734No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA7470.1330412481299423No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCCGGGAGGCGGAGCTTGT6780.1207522974994657No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT6370.11345016741468976No Hit
CATAGATCATGGGACTTCAGCATGGCGGGTGCCTGATTGTTCTATGAGAC6300.11220346227826458No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTTTATGAGAC5780.10294222412196338No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT5760.10258602265441334No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACATAGAACCCAAAGAGTGAGCC5640.10044881384911307No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)