FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90159
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1537117.04876939628878No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG52235.793098858682994No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG37074.111625018023714No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA28443.15442717865105No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC20362.258232677824732No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG18872.092969087944631No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC16811.8644838562983175No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA14471.6049423795738638No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG13331.478499096041438No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA12611.3986401801262216No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA11841.3132355061613372No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA11781.3065805965017359No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG10701.1867922226289112No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGACATGGTTCTACACA9221.022637784358744No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC8810.977162568351468No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC8040.8917578943865837No Hit
CATAGATCAACAATGGATGAGCAAAAGGGACGACATGGTTCTACACATAG7220.8008074623720317No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT6980.7741878237336262No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC6610.7331492141660844No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA6150.6821282401091405No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC5860.6499628434210672No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTATCACGACG5850.6488536918111336No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA5820.645526236981333No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA5560.6166882951230604No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGACATAGTTTTTCCAA5540.6144699919031932No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTATGGTTCTACACATAGATTAA5250.58230459521512No Hit
CATAGATGTGCCTCTCCAACATTCATGAGGGCTAGTCCGTCACCCCTAAT5180.574540533945585No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA4860.5390476824277111No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT4740.5257378631085082No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT4450.493572466420435No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA4240.4702802826118302No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT4130.45807961490256105No Hit
CATAGAAGATGGTCTGCTACACTGGTCATTGGAGACAGCCGCTCACCTCT3890.43145997626415555No Hit
CATAGACCCTTCTCCATGCCACATCATCTATGAGACCAAGTCTCTGCAGG3730.4137135505052186No Hit
CATAGATCATGCAAAGAACACAGGCCCACATAGAAGGAGGGGGCAGATTA3700.41038609567541784No Hit
CATAGACCCTTCTCCATGCCACATCAGCATGTTGAGATGAATAATTGAGA3670.40705864084561716No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGCAGCTGGCACTA3550.39374882152641444No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA3440.38154815381714524No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCAGGAAAGCAATCACC3230.3582559700085404No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC3220.3571468183986069No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG3130.34716445390920486No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTCTAGACGGAGTGAGGGCAGT2850.3161082088310651No Hit
CATAGAAGATGGTCTGCTACACTGGTGTTCCACACTCATGCAAAGCTGGT2800.3105624507813973No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG2780.3083441475615302No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGACGACATGGTTCTACACA2610.28948857019265967No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT2600.28837941858272603No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTCAGGAGGGAAGGAAGGG2360.2617597799443206No Hit
CATAGAGGTCGCAGCTACCCAGAAAGCTAATAGTTTTTCCAAATATAAGA2290.25399571867478565No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT2250.2495591122350514No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA2130.23624929291584865No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG2110.23403098969598154No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGCATGTTGAGATGAATAAT2040.22626692842644663No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC2030.22515777681651303No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGCATGTTGAGATGAATAATTG2000.22183032198671238No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1950.21628456393704454No Hit
CATAGACACCTGGATCCTGTGTTGTCTCATTTCCCCTCTCTCTGAATAAC1920.21295710910724389No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA1840.20408389622777537No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG1840.20408389622777537No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC1830.20297474461784182No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1830.20297474461784182No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC1750.19410153173837333No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAAGTCTCTGCTACCGT1680.1863374704688384No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGTGCAGCTATATTGGAGGAAA1650.1830100156390377No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC1640.18190086402910413No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAAAGGGACAGAGCTGCCCAAGGTC1630.18079171241917058No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCGGAGGCTGCAGTAAGCCAAGA1630.18079171241917058No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCATTCACCAAGTCACCCAGCC1600.1774642575893699No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAAATTCTGGGATTA1580.17524595436950277No Hit
CATAGAAGATCCCATAGCAGCTTTGCCTAGTTTTTCCAAATATAAGATCC1570.17413680275956922No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT1560.17302765114963564No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA1560.17302765114963564No Hit
CATAGATCATGCAAAGAACACAGGCCAGGCGTGGTGCTCACACCTCTAAT1550.1719184995397021No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT1540.1708093479297685No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT1530.16970019631983496No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGTCGGCTAGTCCGTCACCCCTAAT1520.16859104470990138No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1510.16748189309996783No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAAAAACCACTTGAACATTGCCTTT1490.1652635898801007No Hit
CATAGAAGATGGTCTGCTACACTGGTCATGGTTCCACACTCATGCAAAGC1410.1563903770006322No Hit
CATAGATCACCTACACAGACAGCTTTCCTTGTATATGCCATGTCTTCTGT1390.1541720737807651No Hit
CATAGATCATGGGACTTCAGCATGGCCTGGAGACAGCCGCTCACCTCTAT1370.15195377056089798No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1350.14973546734103085No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGATCATGAGGTCAGGTCTAT1320.14640801251123015No Hit
CATAGATCATGCAAAGAACACAGGCCGGGCATGGTGGCTCCTGCCTGTAA1310.1452988609012966No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGGAAAGCAATCACCGCCAG1310.1452988609012966No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCAGATC1300.14418970929136302No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGGGTCCTTTTCACATCATCTATG1250.13864395124169523No Hit
CATAGACTCAAGCAATCCTCCCACCTACACTGACGACATGGTTCTACACA1200.13309819319202743No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA1190.13198904158209387No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAATCAATGC1090.12089752548275824No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA1060.11757007065295755No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGAGCATGTGACCAAACAGA1060.11757007065295755No Hit
CATAGACTCAAGCAATCCTCCCACCTCGGCCTCCCAAAGTGCTGGGATTA1020.11313346421322332No Hit
CATAGATGTGGCTATGCAGACTGAGTCTCTGCTACCGTAGCTCTCTCCAG1010.11202431260328974No Hit
CATAGACTCAAGCAATCCTCCCACCTTACGGTAGCATGTTGAGATGAATA1010.11202431260328974No Hit
CATAGACTCAAGCAATCCTCCCACCTATGGGACTTCAGCATGTTGAGATG1000.11091516099335619No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG990.10980600938342262No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCCGAGA980.10869685777348906No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGCTAGTCCGTCACCCCTAAT970.1075877061635555No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGCTACCGTAAGGGATTATCAGTAG970.1075877061635555No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAGCTATATTGGAGGAAAAGT930.10315109972382124No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGCAGATCATGAGGTCAG920.10204194811388768No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT910.10093279650395413No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA910.10093279650395413No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)