FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90159
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1526016.925653567586156No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG52695.8441198327399375No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG40004.4366064397342475No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT28683.1810468172894555No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG20822.3092536518816758No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG18492.050821326767156No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA18412.0419481138876874No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC16191.7957164564824366No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT14571.6160338956731994No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT13881.539502434587784No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG12971.4385696380838298No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT12051.3365276899699419No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA11901.3198904158209386No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA8800.9760534167415343No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG8750.9705076586918666No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT6810.7553322463647556No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA6700.7431315786554865No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA6680.7409132754356192No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC5860.6499628434210672No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA5760.6388713273217316No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG5630.6244523563925953No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATGTCGTCAGTGTAC5520.6122516886833261No Hit
CATAGATTAGGGGTGACGGACTAGCCCTCATGAATGTTGGAGAGGCACAT5280.5856320500449206No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC4660.5168646502290398No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC4640.5146463470091728No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT4330.4802626471012323No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT4230.46917113100189667No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT4080.45253385685289327No Hit
CATAGATGTGAGCACTACTGATAATCCCTGCAGAGACTTGGTCTCATAGA3890.43145997626415555No Hit
CATAGAGGTGAGCGGCTGTCTCCAATGACCAGTGTAGCAGACCATCTTCT3800.42147761177475346No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTGGCATGGAGAAGG3710.4114952472853514No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC3440.38154815381714524No Hit
CATAGATTAGGGGTGACGGACTAGCCAAGCTTGGTGATGTGTGCCTGTAG3330.3693474861078761No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA3330.3693474861078761No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG3190.3538193635688062No Hit
CATAGACTGGCGGTGATTGCTTTCCTGCAGAGACTTGGCCTCAGTTTCCC3170.35160106034893907No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG2940.32609057332046715No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACACCAGTGTAGCAGACCATCTT2880.3194356636608658No Hit
CATAGAGGGGAGACACTGGCTATAAGAAATACCTGGGCGACCTCTCTATG2870.3183265120509322No Hit
CATAGACTTACTGCCCTCACTCCGTCTAGAGGGAGACACTGGGGGCACAA2840.3149990572211316No Hit
CATAGATGACCTGTTAATCTGCCCCCTCCTTCTATGTGGGCCTGTGTTCT2820.3127807540012644No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC2780.3083441475615302No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT2590.2872702669727925No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGAGAGACTTGGCCTCAGTTTCCC2480.2750695992635233No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCTTTCTGGGT2320.2573231735045864No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCCGGATTCAAGCAATTCTTCTAT2260.250668263844985No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG2140.23735844452578223No Hit
CATAGATTAGGGGTGACGGACTAGCCTCAGTTTCCCCTCCTTCTATGTGT2120.2351401413059151No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGACAACACAGGATCCAGGTG2020.22404862520657948No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC2020.22404862520657948No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC2020.22404862520657948No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA1890.20962965427744318No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA1870.20741135105757608No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG1810.20075644139797472No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC1750.19410153173837333No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA1700.1885557736887055No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG1660.18411916724897126No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCTTGGCCTCAGTTTCCCCTC1650.1830100156390377No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTAGGCAAAGCTGCTAT1610.17857340919930345No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA1600.1774642575893699No Hit
CATAGACCTGACCTCATGATCTGCCTGTGACCTTGGGCAGCTCTGTCCCT1590.17635510597943635No Hit
CATAGATTAGGGGTGACGGACTAGCCGACTGGCCTCAGTTTCCCCTCCTT1580.17524595436950277No Hit
CATAGACTTACTGCCCTCACTCCGTCGCCCAGGCTGGAATGCAATGATGC1580.17524595436950277No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG1570.17413680275956922No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG1570.17413680275956922No Hit
CATAGACCAGCTTTGCATGAGTGTGGTGGCTCATGCTTGTAATCCCAGAA1570.17413680275956922No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1530.16970019631983496No Hit
CATAGAGGCTGGGTGACTTGGTGAATGACTTGGCCTCAGTTTCCCCTCCT1520.16859104470990138No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTTTGGCCTCAGTTTCCCCTCCTT1480.16415443827016715No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA1480.16415443827016715No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAAAGTGCTGGG1410.1563903770006322No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCATGACCAGTGTAGCAGACCA1410.1563903770006322No Hit
CATAGACCAAACACAGAAGACATGGCATATACAAGGAAAGCTGTCTGTGT1410.1563903770006322No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGCCATGCTGAAGTCCCATGATCTAT1400.15528122539069866No Hit
CATAGATTTATCCAGCATGCCCCTCTATGTGTAGAACCATGTCGTCAGTG1340.14862631573109727No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA1340.14862631573109727No Hit
CATAGACTGGCGGTGATTGCTTTCCTGACTTGGCCTCAGTTTCCCCTCCT1320.14640801251123015No Hit
CATAGACCTGACCTCATGATCTGCCTCCCGGATTCAAGCAATTCTTCTAT1300.14418970929136302No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGACCTCCCAAAGTGCTGGG1180.1308798899721603No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT1180.1308798899721603No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGG1170.12977073836222675No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG1170.12977073836222675No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG1160.1286615867522932No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT1140.12644328353242607No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1140.12644328353242607No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC1090.12089752548275824No Hit
CATAGACTTCTGTTTGGTCACATGCTCAGTGTACCAGTGTAGCAGACCAT1010.11202431260328974No Hit
CATAGAGTGGGGGACTAGCATTGATTCTATGTGTAGAACCATGTCGTCAG1000.11091516099335619No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT980.10869685777348906No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA970.1075877061635555No Hit
CATAGATTAGGGGTGACGGACTAGCCATCAATTTAAGGTAGGCACTTCCT960.10647855455362194No Hit
CATAGATGGTGGGTTCTGGAGAGAGCTACGGTAGCAGAGACTCAGTCTGC960.10647855455362194No Hit
CATAGATGTGAGCACTACTGATAATCCCTTACGGTAGCAGACACTGGGGG950.10536940294368836No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGAAGTCCCATAGGTGGGA930.10315109972382124No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACCGTAAGGTGGGAGGAT920.10204194811388768No Hit
CATAGACTTTTCCTCCAATATAGCTGCACACTACAATTACAGTACTAGAT920.10204194811388768No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC920.10204194811388768No Hit
CATAGACCTGACCTCATGATCTGCCTGATGTTTTAAAATGAGCACCTAAC920.10204194811388768No Hit
CATAGACCTGACCTCATGATCTGCCTGTCTTGGCCTCAGTTTCCCCTCCT910.10093279650395413No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)