FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85651
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3404639.74968184843142No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA41094.797375395500344No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG31033.6228415313306326No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG24622.874455639747347No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC17442.0361700388787054No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT16831.9649507886656314No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT14471.6894140173494763No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG12641.4757562667102544No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG12411.4489031067938494No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT9011.0519433515078633No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT5630.6573186536059124No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA5500.6421407806096835No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG4960.5790942312407328No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATGTCGTCAGTGTGC4760.5557436574003806No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC4260.4973672227995003No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG4050.47284912026713055No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT3930.45883877596291933No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC3900.45533618988686647No Hit
CATAGATGGTGGGTTCTGGAGAGAGCACATCTATGTGTAGAACCATGTCG3440.40162987005405654No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA3430.40046234136203895No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT3300.3852844683658101No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG3250.37944682490572207No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTTTTAAAATGAGCA3080.35959883714142277No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCGC2970.3467560215292291No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG2830.33041061984098263No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA2800.3269080337649298No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT2780.32457297638089455No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA2440.28487700085229595No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG2420.2825419434682607No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC2370.2767043000081727No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA2230.2603588983199262No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT2210.258023840935891No Hit
CATAGATGACCTGTTAATCTGCCCCCTCTGTGTGGCGTGGGAGAAATGAT2120.24751608270773257No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC2090.2440134966316797No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA1850.21599280802325715No Hit
CATAGATTAGGGGTGACGGACTAGCCATCAATTTAAGGTAGGCACTTCCT1850.21599280802325715No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA1840.21482527933123957No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1780.20782010717913393No Hit
CATAGAGTGGGGGACTAGCATTGATTCTATGTGTAGACCAGTGTAGCAGA1720.20081493502702827No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTCGTCAGACCAGTGTAGCAGACC1640.19147470549088744No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGCTATA1630.19030717679886983No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGGGAAGTAGGG1620.18913964810685224No Hit
CATAGACCAAACACAGAAGACATGGCAAAGCTGCTATGGGATCTTCTATG1610.18797211941483463No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCTTACGCAGTGTGTCTTTAGGCT1580.1844695333387818No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1570.1833020046467642No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACTTGGCCTCAGTTTCCCCTCCTT1560.18213447595474658No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA1520.17746436118667616No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1470.17162671772658813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1470.17162671772658813No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA1440.1681241316505353No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA1440.1681241316505353No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT1430.16695660295851772No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1430.16695660295851772No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC1390.16228648819044728No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1390.16228648819044728No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTCTAACCTAGTGATTACCTGGGT1360.15878390211439447No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCTCCTCTATGAGACCAACCAT1320.15411378734632403No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT1310.15294625865430642No Hit
CATAGACTGGCGGTGATTGCTTTCCTATAGACCTCCAAGCAGATCTGTGT1300.1517787299622888No Hit
CATAGACCAGCTTTGCATGAGTGTGGCAGACACCAGTGTAGCAGACCATC1250.1459410865022008No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1230.14360602911816556No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1200.14010344304211275No Hit
CATAGATGTGAGCACTACTGATAATCCCTGACTTGGCCTCAGTTTCCCCT1180.13776838565807756No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG1100.1284281561219367No Hit
CATAGACTGGCGGTGATTGCTTTCCTAGAGACTCAGTCTGCATAGCCACA1090.1272606274299191No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG1040.12142298396983105No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT1020.11908792658579584No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG1000.11675286920176063No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1000.11675286920176063No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA990.11558534050974303No Hit
CATAGATGACCTGTTAATCTGCCCCCCTTGGCCTCAGTTTCCCCTCCTTC960.11208275443369022No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG940.109747697049655No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGACTTGGCCTCAGTTTCCCCTCCT910.10624511097360217No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC890.10391005358956697No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA880.10274252489754937No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)