FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807199

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807199
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89180
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3911543.860731105629064No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA35373.966135904911415No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC20582.307692307692308No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC12871.4431486880466473No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT11791.3220453016371383No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC11721.314196008073559No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT11541.2940121103386408No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT9781.096658443597219No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA9151.0260148015250057No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG9081.0181655079614262No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCGCTACCGTAGACTTGTGCTCA8040.901547432159677No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC7740.8679076026014803No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTCAGTGTACTTCAGTTG7630.8555729984301412No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA6720.7535321821036106No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG6710.7524108544516708No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT5640.6324287956941018No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG5550.6223368468266427No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACCACTTCAGTTGACTAT5260.5898183449203858No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA4730.5303879793675712No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA4540.5090827539807131No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT3920.43956043956043955No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC3910.43843911190849966No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT3910.43843911190849966No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC3780.423861852433281No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCCGAGAGGTGGAGCTTGC3770.4227405247813411No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGCCCTCACTTCAGTTGACT3750.4204978694774614No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG3400.38125140165956495No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC3280.3677954698362862No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTTCTACAC3270.3666741421843463No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC2980.33415564027808925No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT2920.3274276743664499No Hit
CATAGACAGCTCACAGACTGCATACTGGGTGAGAAATGATGATGGCTCTA2890.3240636914106302No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC2810.315093070195111No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2500.2803319129849742No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG2370.2657546535097555No Hit
CATAGACCTTCCTGTTGGCCACACAGGTTGCAGTGAGCTAAAATCATACC2300.25790535994617625No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG2270.25454137699035656No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2260.25342004933841666No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGGATCACTTGAGCCTGGGAGTTA2260.25342004933841666No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGTCTCTGCTAC2120.23772146221125814No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT2050.22987216864767887No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1840.20632428795694102No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTCAGACATGTTTCCTAGTTT1810.2029603050011213No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1810.2029603050011213No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1710.19174702848172234No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC1690.18950437317784258No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTCTGACGACATGGTGGGTGCCTGA1680.18838304552590265No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1670.18726171787396279No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACACTGACGACATGGTGGGTGCCT1650.18501906257008296No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1590.1782910966584436No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1560.1749271137026239No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA1530.1715631307468042No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1450.16259250953128504No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA1370.15362188831576587No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA1340.15025790535994615No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGGCAACAGAA1300.1457725947521866No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT1300.1457725947521866No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTTCTAC1290.1446512671002467No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1210.13568064588472753No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC1190.1334379905808477No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTTCAGATTTGGACCTGCG1180.13231666292890784No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTAATGGGCAACAGAACAACAACA1180.13231666292890784No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC1170.13119533527696794No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1170.13119533527696794No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGAGGAATTCTTGCCAGGGATC1170.13119533527696794No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGAAGAAGAGAGCCTCTGTCCCTG1130.12671002466920833No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA1100.12334604171338864No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA1070.11998205875756895No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC980.10989010989010989No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC980.10989010989010989No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT970.10876878223817No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA960.1076474545862301No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG950.1065261269342902No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT950.1065261269342902No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC910.10204081632653061No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)