FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89180
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3692041.39941690962099No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT34743.8954922628392015No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG30833.4570531509307023No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG17942.011661807580175No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA15041.686476788517605No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG14741.6528369589594079No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT11161.2514016595649249No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA10511.1785153621888316No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT9511.066382596994842No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG8981.0069522314420274No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT8300.9307019511101143No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCTACGGTAGCGGAGA8020.8993047768557973No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTGACACTATGGCTTA7610.8533303431262615No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG6990.7838080287059879No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG6880.7714734245346491No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT6800.7625028033191299No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG5270.5909396725723257No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGGTCTCATAGAGGTTTCCT4990.5595424983180085No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA4500.5045974433729535No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG4480.5023547880690737No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT4280.4799282350302758No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG4210.4720789414666966No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA3720.41713388652164163No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT3700.41489123121776184No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGAGGGCCAGAAGCTTTGAG3610.4047992823503027No Hit
CATAGACTCACTCTGTCACCCAAGCTGGATTGCAGTGGCGCGATCTCTGC3120.3498542274052478No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC3010.33751962323390894No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA2940.32967032967032966No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA2830.3173357254989908No Hit
CATAGAGCCATCATCATTTCTCACCCAGTATGCAGTCTGTGAGCTGTCTA2800.3139717425431711No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT2760.30948643193541153No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC2490.2792105853330343No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2400.26911863646557527No Hit
CATAGACTCACTCTGTCACCCAAGCTGAAGTGCAGTGGTATGATTTTAGC2270.25454137699035656No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2220.2489347387306571No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCACTGACACAGTCACAAC2210.24781341107871718No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2180.24444942812289752No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2020.22650818569185915No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA1900.2130522538685804No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA1870.20968827091276068No Hit
CATAGAGGTGAGCGGCTGTCTCCATAAGTCCGCGCAGAGCCTTCAGGTCA1840.20632428795694102No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT1780.19959632204530164No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGAGGTAAACAAACTTCTG1740.19511101143754203No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1710.19174702848172234No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG1670.18726171787396279No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTTGTGACACCGAAAA1640.1838977349181431No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1610.1805337519623234No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC1600.1794124243103835No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1590.1782910966584436No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1470.16483516483516483No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1450.16259250953128504No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA1340.15025790535994615No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1340.15025790535994615No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACCAAAAGCACA1270.1424086117963669No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA1240.13904462884054722No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG1230.13792330118860732No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG1220.1368019735366674No Hit
CATAGATGTTGTTGTTCTGTTGCCCATTAAGCCATTGTCGCCTTCTCTTC1100.12334604171338864No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1090.12222471406144876No Hit
CATAGATCCCTGGCAAGAATTCCTCAGGAAAGTTGGAACCTATCAGTGTC1070.11998205875756895No Hit
CATAGACGGGAAGAGTAAGACCACCCCAGCTCCACAGGGACAGAGGCTCT1050.11773940345368916No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA1030.11549674814980938No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1000.1121327651939897No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC990.11101143754204978No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG970.10876878223817No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT970.10876878223817No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAGTCCGCGCAGAGCCTTCAGGTCA960.1076474545862301No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT950.1065261269342902No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA940.10540479928235032No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC940.10540479928235032No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA900.1009194886745907No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)