FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences286137
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA275239.618818957352596No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC185146.470327150980125No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC149825.23595340693444No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC143765.024166745300328No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA104723.659785347578258No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG103843.6290308488591125No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG95833.349095013926895No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT77892.722122619584325No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA77352.7032505408248495No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG71242.489716464490786No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA59042.063347277702639No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT52791.844920440208711No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT52671.8407266449288278No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA47711.6673831066936466No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC41831.4618871379793597No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT39351.375215368861769No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG32951.151546287267987No Hit
CATAGACTTGATGCCCAGGAAACCTCGGCAGTGAGGTACAGAAATCTATG30131.0529920981907268No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA29571.033421053551271No Hit
CATAGAACAAGGCCAGAATTACCCTGACACTGGAGACAGCCGCTCACCTC23690.8279250848369837No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA23530.822333357797139No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGTGCTCATACAGAATTAGATC23300.8142952501773626No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT22660.7919283420179843No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT19700.6884813917808602No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCTTTTAACGGACACACGCTGCTCT18650.6517856830818803No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG17920.6262734284625896No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGGAGACAGCCGCTCA17380.6074013497031142No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC15580.544494420504863No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG15340.5361068299450963No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG15280.5340099323051546No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT14910.521079063525514No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGACTTCAGTTGACTATAAGAA13770.4812380083666216No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC13300.46481231018707825No Hit
CATAGACTTGATGCCCAGGAAACCTCACTTCAGTTGACTATAAGAAACAC13150.4595700660872239No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTTACAACCAATGCTCTTTC12660.4424454020277No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC12360.43196091382799146No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT12320.43056298206803034No Hit
CATAGACCACACCCAAACACCACGTAACACTGGAGACAGCCGCTCACCTC11830.41343831800850644No Hit
CATAGACCACACCCAAACACCACGTAGAGAATTAGCGGAGAGTGAGAACT11250.39316830748906995No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGTGTCTGGGTGAGAAATGATGATG10990.3840817510493225No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT10840.3788395069494683No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC10720.3746457116695849No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC10310.3603169111299832No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGCCTGAGATTGCTGCTATCTATG10280.3592684623100123No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGTACACTGACTCTTCACTATGTCA9500.33200879299077013No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT9440.3299118953508285No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTAGAGGCCTGAGA9220.3222232706710422No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC9170.32047585597109074No Hit
CATAGAGAAGAGAAGGCGACAATGGCTAGAGAATTAGCGGAGAGTGAGAA9090.31767999245116846No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGGGTGGTCTTACTCTTCC8960.3131367142312948No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGATCTGAGCAAGGAT8710.3043996407315377No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGAGACAGCCGCTCACCTCTA8530.2981089478117126No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGCGTCCGCAGTTGTTCTTT8360.29216773783187777No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACTCTTCACTATGTC8350.29181825489188745No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA8160.2851780790320721No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC8000.2795863519922275No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA7640.2670049661525773No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTAAGAATTAGCGGA7520.26281117087269384No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA7460.26071427323275215No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT7390.25826789265282013No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTGGGTGCCTG7290.25477306325291726No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT7260.25372461443294647No Hit
CATAGAACAATGTAATAAGCATCGGAGGACTTCAGTTGACTATAAGAAAC7260.25372461443294647No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT6910.2414927115332865No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACTCTTCACTATGTCATC6470.226115462173714No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG6430.22471753041375286No Hit
CATAGACAGGAGGAGGAAGAAGAGGATCTATGAGACCAAGTCTCTGCTAC6280.2194752863138986No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACGTCCGCAGTTGTTCTTTCC5830.20374855401433578No Hit
CATAGAGAAGAGAAGGCGACAATGGCCACTGACGACATGGTTCTACACAT5820.20339907107434552No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC5820.20339907107434552No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA5800.20270010519436496No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC5710.19955475873445236No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA5610.19605992933454955No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGGACTCTTCACTAT5490.19186613405466613No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC5240.18312906055490902No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG5020.17544043587512276No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT4920.17194560647521992No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT4810.1681012941353268No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACTCTTCACTA4720.16495594767541424No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCTTGTGCTCATACAGAATTAGATC4660.16285905003547252No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGCAGTCTCAAACGTTGTGTCTAT4610.1611116353355211No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGAGAGGTCTTGGCAGGCT4450.15551990829567655No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG4350.15202507889577369No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC4340.15167559595578342No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT4300.15027766419582228No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG4200.14678283479591944No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGGTCTTACTCTTCCCGTCTATGAG4050.14154059069606517No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT3960.1383952442361526No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT3930.13734679541618178No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG3710.1296581707363955No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGGGACATGGATGAAGC3650.1275612730964538No Hit
CATAGATCATGGGACTTCAGTTGACTATAAGAAACACCTCTATGAGACCA3570.12476540957653151No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3480.12162006311661896No Hit
CATAGATCTGTGGCTCCCGATAAATGTCGGCAGTGAGGTACAGAAATCTA3460.12092109723663838No Hit
CATAGATCTGTGGCTCCCGATAAATGTCGTCAGTGTGCTGCTTTTCTCTT3410.11917368253668698No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG3300.11532937019679386No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCCCTTGTGCTCATACAGAATTAGA3300.11532937019679386No Hit
CATAGAGGGTGTTTTTCGGTGTCACATGGTGGGTGCCTGATTGTTCTATG3210.11218402373688127No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGACTCTTCACTATGTCAT3040.10624281375704646No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC3020.10554384787706589No Hit
CATAGAGCTTCTTCCTGTTCATATTGGGCAACAGAACAACAACATCTATG2880.10065108671720191No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)