FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73347
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT57697.865352366149944No Hit
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG55567.574951940774674No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT52047.0950413786521604No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG39145.336278239055449No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT28193.8433746438163796No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT26363.593875686803823No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT21382.9149113119827668No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG20202.754032203089424No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG19522.6613222081339387No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT18622.538617803045796No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT15012.046436800414468No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT12041.6415122636235975No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11061.5079008003053977No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT10811.473816243336469No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC8981.2243172863239125No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG8811.201139787585041No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA8721.1888693470762266No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT8461.153421407828541No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT8451.1520580255497839No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC7941.0825255293331697No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA7741.0552578837580269No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6330.8630209824532701No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA5400.736226430528856No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5130.6994151090024132No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG4930.6721474634272704No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC4480.610795260883199No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4400.5998882026531419No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3920.5344458532727991No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3850.5249021773214991No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3650.49763453174635636No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT3500.47718379756499923No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3440.46900350389245643No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC3160.43082880008725644No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT3070.41855835957844223No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT3070.41855835957844223No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC2940.40083438995459936No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG2940.40083438995459936No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT2920.39810762539708505No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC2810.38311042033075654No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA2690.3667498329856709No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT2680.3653864507069137No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2620.35720615703437086No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG2440.33266527601674234No Hit
CATAGACAGGGGCCAGAACTCCTAAGACTTGGTCTCATAGACAGGGGTGT2390.32584836462295663No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2350.3203948355079281No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT2310.3149413063928995No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT2240.3053976304415995No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2160.2944905722115424No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC2080.28358351398148524No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG1960.26722292663639957No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT1950.2658595443576424No Hit
CATAGACAGGGGCCAGAACTCCTAAGAGACTTGGTCTCATAGACAGGGGT1900.2590426329638567No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT1850.252225721570071No Hit
CATAGACTTGTTGCCGAGACTGGAGTGCAGTGGCATGATCTTGGCTAACT1800.24540881017628535No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT1720.23450175194622822No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1710.2331383696674711No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG1610.21950454687989968No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT1600.21814116460114252No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1500.2045073418135711No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1390.18951013674724257No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1310.17860307851718543No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCAAGGGCAGGGCTGCATGG1310.17860307851718543No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACGGTAGCAGCTCCTCTTC1280.174512931680914No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT1280.174512931680914No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA1270.17314954940215688No Hit
CATAGATGGCCCACTGACATTTTCCTTCTCATAGATGGGTCCCAAAGTAG1260.17178616712339972No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGCAGACACTTGAAAGCT1190.16224249117209974No Hit
CATAGAACTCTTACCCTTTTGCCAGGACCACTAAGGTGGAGAGGGCCTGC1180.1608791088933426No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1170.15951572661458546No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1160.15815234433582834No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG1110.15133543294204263No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1010.13770161015447122No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT980.13361146331819979No Hit
CATAGAAAAGGGAGGGATTACGGGTGCTGAAGGATAGTTGGGTGCTCTAT970.13224808103944266No Hit
CATAGATGAAAACATTCCGAAGCTAGATCATGGGTCCCAAAGTAGGCAAT920.12543116964565695No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG890.12134102280938552No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT850.11588749369435697No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGGCTTTTCCAATCCCCTTTG830.11316072913684268No Hit
CATAGACAGGGGCCAGAACTCCTAAGGTCTCATAGACAGGGGTGTGGTGT780.10634381774305697No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGTCCAAGGTCAAGGGCAGGGAT770.10498043546429985No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG770.10498043546429985No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT760.10361705318554269No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC740.1008902886280284No Hit
CATAGAAGGGGTGATGCTCTGATGGATGCTCTGAGGAAGTGACATGCCAT740.1008902886280284No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT740.1008902886280284No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)