FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36840
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1557942.28827361563518No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT12043.2681867535287736No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG9952.700868621064061No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG5781.568946796959826No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCCATACCAAGAATAAGAA5311.4413680781758957No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA4121.1183496199782845No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4121.1183496199782845No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG3510.9527687296416938No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG3320.9011943539630837No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG3200.8686210640608035No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG2450.6650380021715527No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT2380.6460369163952225No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT2190.5944625407166124No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA2180.5917480998914224No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT2150.5836047774158524No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGTGTAGAGGCAAGGGTAC1890.5130293159609121No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT1660.45059717698154184No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT1660.45059717698154184No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAGAGAAGCTTTGAGATTTG1500.40716612377850164No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1470.39902280130293155No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT1400.3800217155266015No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTACTATGGCTTAATGTTTCTC1330.3610206297502715No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA1270.34473398479913137No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG1260.34201954397394135No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA1230.3338762214983714No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCCAAGTACTATGGCTTAATG1200.32573289902280134No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTAGAGACTTGGTCTCATAGAGAA1200.32573289902280134No Hit
CATAGACACAACGTTTGAGACTGCCTATAGAGAAGCTTTGAGATTTGTGT1180.3203040173724213No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC1150.3121606948968513No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1110.3013029315960912No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAAAGAAGCTTTGAG1040.28230184581976114No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC1030.27958740499457113No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG1020.2768729641693811No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG970.26330076004343106No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA960.26058631921824105No Hit
CATAGAACAATCAGGCACCCACCATGATCTATGAAGAAGCTTTGAGATTT910.247014115092291No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTGGAGGCTGAAACTC910.247014115092291No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA880.23887079261672098No Hit
CATAGATTTCTGTACCTCACTGCCGAGGTTTCCTGGGCATCAAGTCTATG880.23887079261672098No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT860.23344191096634093No Hit
CATAGATAGCAGCAATCTCAGGCCTCAGTGTACACTGTGACACCGAAAAA850.23072747014115094No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA840.2280130293159609No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT830.22529858849077092No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT810.21986970684039087No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG790.21444082519001084No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC770.20901194353963085No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA770.20901194353963085No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA750.20358306188925082No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC730.1981541802388708No Hit
CATAGACTCACTCTGTCACCCAAGCTGGGCGTGGTGGCTCATGCCTGGAA700.19001085776330076No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCACACTATGGCTTAATGTTT690.18729641693811075No Hit
CATAGATCTCAAACAGCCTCTCCCAGCAACTTTCCTCCGATGCTTATTAC650.1764386536373507No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA640.17372421281216072No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC630.17100977198697068No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTTCCCCAATATGAAC630.17100977198697068No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGTACGGTAGCAGAAGCT620.16829533116178066No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA600.16286644951140067No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTATGGGAGGCTGAAACTCT600.16286644951140067No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG590.16015200868621066No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG570.1547231270358306No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG570.1547231270358306No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC560.15200868621064062No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA560.15200868621064062No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA550.1492942453854506No Hit
CATAGATCCCTGGCAAGAATTCCTCACACTGAAACATTTTCTGGTCAGCT550.1492942453854506No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA530.14386536373507056No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCT530.14386536373507056No Hit
CATAGACACAACGTTTGAGACTGCCTTCCCCAATATGAACAGAAAGAAGC520.14115092290988057No Hit
CATAGAACAATCAGGCACCCACCATGTGACACCGAAAAACACCCTCTATG510.13843648208469056No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA510.13843648208469056No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACACTGAAACATTTTCTGGTCAG490.13300760043431054No Hit
CATAGATGAAAGAGCATTGGTTGTAACACACACATAGAGGCAAGGGTACT490.13300760043431054No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA480.13029315960912052No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGTCTTCAGGTCA480.13029315960912052No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT480.13029315960912052No Hit
CATAGATCCAGCTTCATCCATGTCCCTACGGTAGCAGAGACTCGGTCTCA460.1248642779587405No Hit
CATAGAACAATCAGGCACCCACCATGTCCAGGAAAGTTGGAACCTATCAG450.12214983713355047No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTTACGGAGGCTGAAACTCTAAGG440.11943539630836049No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA440.11943539630836049No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTACCAAAAGCACAAG430.11672095548317046No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA430.11672095548317046No Hit
CATAGAGGAAAGAACAACTGCGGACGGTCTCATAGAGGAAAGAACAACTG430.11672095548317046No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGCCATACCAAGAATAAGAACTA430.11672095548317046No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA420.11400651465798045No Hit
AATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA420.11400651465798045No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA420.11400651465798045No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTGCCATTGTCGCCTTCTCTTC410.11129207383279045No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGTACGGTAGCGGAGACC410.11129207383279045No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA400.10857763300760044No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC390.10586319218241043No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA370.10043431053203042No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTACATTTATCGGGAGCCACAG370.10043431053203042No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)