FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88233
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1651618.718620017453787No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA82229.318508947899312No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG50605.734815771876735No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG40104.544784831072275No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG39194.441648816202554No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA26643.019278501241032No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC24172.7393378894517926No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT22142.5092652408962635No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG21622.4503303752564234No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC14401.6320424331032608No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT13571.53797332063967No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA10921.2376321784366393No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA10391.1775639499960333No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT10381.1764305871952672No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA10061.1401629775707502No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA9611.0891616515362734No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA8941.0132263438849411No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT7190.8148878537508641No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT6980.791087234934775No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG5910.6698174152527966No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT5750.6516836104405381No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA5570.6312830800267474No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG4800.5440141443677535No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT4510.511146623145535No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC4150.4703455623179536No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC4130.4680788367164213No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT3820.4329445898926705No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA3620.4102773338773475No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC3590.406877245475049No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGCCCTCTCTGCTGTTCCT3440.38987680346355674No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG3140.3558759194405721No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA2920.3309419378237167No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2790.31620822141375676No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2780.3150748586129906No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAATGATGCTGAAGTGATGGGC2360.2674736209808122No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG2310.2618068069769814No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG2300.26067344417621524No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2280.25840671857468295No Hit
CATAGATGGCCAAGATACGAGCACATTGCTTCTTGTGGTAACTGGTCTAT2140.24253963936395678No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG2070.2346060997585937No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC2050.23233937415706143No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG2040.2312060113562953No Hit
CATAGACCCAAGACCCCAGCCTTTACTCCCAAGTATTAGAGCAAGTTGTT1890.21420556934480298No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA1890.21420556934480298No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGACATGGTCTACCA1830.20740539254020604No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG1820.20627202973943992No Hit
CATAGACCTCCGACAGTTTTTATGCACACTGTCATTGTCGCTGTCCCATC1810.20513866693867375No Hit
CATAGAAGGACAAAGACATTTAGGACCCAAATGATGCTGAAGTGATGGGC1810.20513866693867375No Hit
CATAGACATTTAATCCTCACAATGACCCATGCCATTGCTTCTTGTGGTAA1780.20173857853637528No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA1700.19267167613024605No Hit
CATAGAAGGACAAAGACATTTAGGACCCACTGCCCTCTCTGCTGTTCCTT1690.1915383133294799No Hit
CATAGACACAACAGAGAGAACGGGCTGGTGCATTACAGAGAGGAGATCTA1680.19040495052871376No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA1590.18020468532181838No Hit
CATAGACACAACAGAGAGAACGGGCTGCCCTCTCTGCTGTTCCTTCTATG1430.16207088050955992No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT1320.14960388970113223No Hit
CATAGACGTGACTAAAAGCATGTTGGTGACATGGTTCTACACATAGAGAT1300.1473371640995999No Hit
CATAGAGTGCCTGTTTCCTCATTCGTATAGAGTGTCTGTTTCCCCACTCA1290.14620380129883379No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA1290.14620380129883379No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT1280.1450704384980676No Hit
CATAGATGAGGACACCATAAAGACAACACACTGTGTGCTTGAACCAGATT1250.14167035009576917No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA1250.14167035009576917No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGTTTCCCCACTCAAAT1200.13600353609193838No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT1180.1337368104904061No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG1140.12920335928734147No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1110.125803270885043No Hit
CATAGAGAAGACTCCCTCAACCCACCCATAGAGATCCCACCATTTGCCAT1090.12353654528351071No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGTCATTGTCGCTGTCCC1080.12240318248274455No Hit
CATAGACTCATTGCACTTTCCACAACTGTCGTCCCAACTGTCTCTGAAAA1040.11786973127967994No Hit
CATAGACCAGCAGACACTCCCATCATTTCTACACATAGAAATGATGCTGA1010.11446964287738148No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC1000.11333628007661532No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG980.11106955447508303No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAC960.10880282887355071No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGGTGGAAGGGTAAGAGAGGG950.10766946607278455No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGTCTTCTGTTCTTCCTTTTCTGC920.1042693776704861No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT910.10313601486971996No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGACAAGTGTGTGTGTGCCATTGTG900.1020026520689538No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA900.1020026520689538No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)