FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88233
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1698619.25130053381388No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT82149.309442045493183No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG50275.697414799451452No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG39904.522117575056951No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG39034.423515011390297No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC26833.040812394455589No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG24122.733671075447962No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG21702.4593972776625526No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT21522.438996747248762No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC14321.6229755306971314No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT13671.5493069486473314No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT11101.2580327088504302No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT10601.2013645688121224No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT10301.1673636847891378No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA10041.137896251969218No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA9511.0778280235286117No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT8780.9950925390726826No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG7130.8080876769462673No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT7000.7933539605363072No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG5940.673217503655095No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT5720.6482835220382397No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA5510.6244829032221505No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG4810.5451475071685197No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT4660.5281470651570275No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC4390.4975462695363413No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC4230.47941246472408283No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC4160.47147892511871975No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT3860.4374780410957351No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC3680.4170775106819444No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTAAAGGCTGGGGTCTT3580.40574388267428285No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCAACATGCTTTTAGTCACG3390.38420998945972595No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG3120.3536091938390398No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA2880.32640848662065214No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT2830.32074167261682135No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT2830.32074167261682135No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCAGCAGGCCCTTCAGCAT2360.2674736209808122No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG2290.2595400813754491No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG2280.25840671857468295No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG2150.24367300216472293No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGCTCGTATCTTGGCCATCTAT2130.24140627656319066No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC2010.2278059229539968No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT1970.2232724717509322No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGTAAAGGCTGGGGTCTTGGGT1890.21420556934480298No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGTCAGTGTGGGT1850.20967211814173833No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGTCCTAAATGTCTTT1850.20967211814173833No Hit
CATAGATGGGACAGCGACAATGACAGTGTGCATAAAAACTGTCGGAGGTC1840.2085387553409722No Hit
CATAGACCAGTTACCACAAGAAGCAATGGCATGGGTCATTGTGAGGATTA1820.20627202973943992No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGGGTTGAGGGAGTCTTCTCTATG1770.20060521573560913No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTGGGTCCTAAATGTCTTTG1770.20060521573560913No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT1760.19947185293484296No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGGGTCCTAAATGTCTTTGTCCTT1650.1870048621264153No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCCCGTTCTCTCTGTTGTGTCTA1630.18473813652488297No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT1620.18360477372411682No Hit
CATAGAAGGAACAGCAGAGAGGGCAGCCCGTTCTCTCTGTTGTGTCTATG1420.16093751770879375No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCACCAACA1340.15187061530266452No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT1330.1507372525018984No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA1320.14960388970113223No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATACGAATGAGGAAA1300.1473371640995999No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT1280.1450704384980676No Hit
CATAGAATCTGGTTCAAGCACACAGTGTGTTGTCTTTATGGTGTCCTCAT1260.1428037128965353No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT1210.13713689889270456No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT1190.13487017329117224No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACTGTTAATATAGAAGAGACAC1190.13487017329117224No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT1140.12920335928734147No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCAGACTCTATGTGTAGAACCA1130.12806999648657533No Hit
CATAGATGGGACAGCGACAATGACAGTGTACCCTGGGAGAAGAAATGTTG1130.12806999648657533No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG1100.12466990808427686No Hit
CATAGATGGCAAATGGTGGGATCTCTATGGGTGGGTTGAGGGAGTCTTCT1080.12240318248274455No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG1040.11786973127967994No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGACAGTTGTGGAAAGTGCAAT1030.11673636847891378No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG1020.11560300567814764No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAAATGATG1010.11446964287738148No Hit
CATAGACCCTCTCTTACCCTTCCACCACTGACGAATGAGGAAACAGGCAC1010.11446964287738148No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1010.11446964287738148No Hit
CATAGAGCAACAATGAAGGTGCACAAACAAGCACAATGGCACACACACAC930.10540274047125225No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)