FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807215

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807215
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131955
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1373710.41036717062635No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG70385.333636466977379No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG70285.326058125876246No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC59854.535637149028078No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG57804.380281156454853No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA44173.347353264370429No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG41463.1419802205297263No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT30302.2962373536432876No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA30042.2765336667803417No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG27892.113599333105983No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT27432.0787389640407716No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC24191.8332007123640637No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT21561.6338903414042667No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG19911.5088477132355727No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC19841.5035428744647796No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA18251.3830472509567655No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG17351.314842181046569No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA15731.192073055208215No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA15241.1549391838126635No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT13551.0268652192035164No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC12440.9427456329809405No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA12250.9283467848887879No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT9860.74722443257171No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA9700.7350990868098973No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA9410.7131218976166117No Hit
CATAGATCACGTAGAAACTGGAGAGGCTGGTGCATTACAGAGAGGAGATC9050.6858398696525331No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA8170.619150467962563No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT7870.5964154446591642No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA7750.5873214353378046No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG7240.5486718957220265No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6730.5100223561062484No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC6560.4971391762343223No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG6510.49335000568375587No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGCCCTCTCTGCTGTTCCTT6440.48804516691296274No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG5970.4524269637376378No Hit
CATAGAAGGACAAAGACATTTAGGACCCCTGCAGTCTTTGGAGGAATCTA5960.45166912962752453No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA5890.44636429085673146No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT5840.44257512030616497No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGGTTCTACAAAGGATTCTGGG5640.42741843810389907No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGGCTCAGGTATGTCTTT5310.4024099124701603No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC5140.3895267325982342No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5120.38801106437800764No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA5030.381190557386988No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACGCTATACCACACTACACACT4840.36679170929483534No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT4200.3182903262475844No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT4100.31071198514645143No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTACACTGACGCTATACCACACTA3910.2963131370542988No Hit
CATAGACCAGCAGACACTCCCATCATAGACTGGGCCCCAGTGTGAATACT3870.2932818006138456No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG3730.28267212307225953No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACATGATGCTGAAGGACAT3640.2758516160812398No Hit
CATAGATGTGTAGCCTGGGTCTGACAAGGGGTAAGGCGTACTGGTCTATG3480.2637262703194271No Hit
CATAGAAGGACAAAGACATTTAGGACCCACCCACAGCCAGGAAAGAATCT3460.2622106020992005No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGATCATTGTTCACT3370.25539009510818084No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGCTATACCACAC3370.25539009510818084No Hit
CATAGATCCACGTGAGAATAAAGCATACAACACTGACGACATGGTTCTAC3190.2417490811261415No Hit
CATAGATGGCCAAGATACGAGCACATAGAGATCCCACCATTTGCCATCTA3120.2364442423553484No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT3010.22810806714410217No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA2960.22431889659353565No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGGCTCAGGTATGTCTT2790.21143571672160963No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2740.20764654617104317No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT2660.2015838732901368No Hit
CATAGATCACGTAGAAACTGGAGAGGCGGAGGTTACAGTGAGCCAAAATT2610.1977947027395703No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGACATGGTT2590.1962790345193437No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2550.19324769807889053No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT2520.19097419574855065No Hit
CATAGACATTTAATCCTCACAATGACCCATGTTGAGGAGCTGAGTCATGG2450.18566935697775758No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2380.1803645182069645No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCGACATGGTTCTACACAT2220.16823917244515174No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA2220.16823917244515174No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT2210.16748133833503848No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2050.15535599257322572No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGGTCTACC2050.15535599257322572No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC2020.15308249024288584No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGGGTGGAAGGGTAAGAGAGG2010.15232465613277255No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2010.15232465613277255No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG1960.14853548558220606No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGGTGGAAGGGTAAGAGAG1940.14701981736197944No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG1830.1386836421507332No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT1760.13337880337994013No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCATGACAGAGCGAGACTTCTATT1760.13337880337994013No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACTGACGACATGGTTCT1750.13262096926982683No Hit
CATAGAAAGGTGCAATCAAGCCAGTTGAGGAGCTGAGTCATGGGGTCTAT1700.12883179871926034No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTTCTCCCAAGTATTAGAGCAA1650.12504262816869388No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1650.12504262816869388No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAGCTCTAA1650.12504262816869388No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA1640.12428479405858057No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC1600.12125345761812738No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG1590.1204956235080141No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGTTTCCCCACTCAAATACC1560.1182221211776742No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1550.11746428706756092No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATGAGACCAAGTCT1540.11670645295744761No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCAGCAGCATAATTTCCCAT1510.11443295062710773No Hit
CATAGACGTGACTAAAAGCATGTTGGTTACGGTAGCAGCATAATTTCCCA1480.11215944829676783No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1460.11064378007654124No Hit
CATAGACTCATTGCACTTTCCACAACTGTGAGCTGTCTGCCTCTAAGTAA1450.10988594596642795No Hit
CATAGACTCATTGCACTTTCCACAACTGTTGTCCCAACTGTCTCTGAAAA1410.10685460952597477No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1400.10609677541586146No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTCCCAACTGTCTCTGAAAAA1350.10230760486529498No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)