FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807217

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807217
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128190
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2147716.75403697636321No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA52344.083001794211717No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA40873.1882362118730008No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG38302.9877525548014665No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA29982.3387159684842813No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT29142.273188236211873No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG25211.9666120602231063No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG24491.910445432561042No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG16941.321475934160231No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC16521.288712068024027No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA14011.0929089632576643No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA13961.0890085030033545No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA13951.0882284109524925No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT13421.0468835322568064No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA13291.0367423355956003No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT13211.030501599188704No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA12400.9673141430688821No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC11820.922068804118886No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT11620.9064669631016461No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA9360.7301661596068336No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9230.7200249629456276No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG8550.6669787034870115No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8450.6591777829783915No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8440.6583976909275295No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7600.5928699586551213No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT7590.5920898666042593No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7580.5913097745533973No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG7220.5632264607223653No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA7020.5476246197051252No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC7020.5476246197051252No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC6640.5179811217723692No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCATAGAACAGCTAAAAAT6420.5008190966534051No Hit
CATAGATGCTTCTGATATGTTGCCGTAAACTTAGCAACCTGTACATTTCG6030.470395506669787No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG5770.45011311334737497No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGAGAACAGCTAAAAATCTTGGAG5450.4251501677197909No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA5390.42046961541461886No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG5370.4189094313128949No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA5190.40486777439737887No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGACAGTGAAACAAGATCGT5130.4001872220922069No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA5070.39550666978703486No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG5030.3923863015835869No Hit
CATAGACCCCATGTGCAGTGTAAGCTCATAGACATGTGTGAGAGGGAAGG4830.37678446056634685No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA4590.3580622513456588No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA3850.30033543958187064No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACATTAGCTTAGTTAATTAG3780.29487479522583665No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC3710.2894141508698026No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG3690.2878539667680786No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA3610.28161323036118263No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT3580.2792729542085966No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA3460.2699118495982526No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3380.2636711131913566No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACATTAGCTTAGTTAATT3360.26211092908963257No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3260.25431000858101255No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGACCAAAGCTAGAAACTCCCAT3160.24650908807239252No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT3130.24416881191980655No Hit
CATAGAAGGAGCTGGACTGGATGGACTCACATGTGTGAGAGGGAAGGACT3050.2379280755129105No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT3050.2379280755129105No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTAAATGTACAGGTGCAAATTG3040.23714798346204852No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCCTTGGAGAGAAATGCTGCT2990.2332475232077385No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2940.22934706295342852No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT2840.2215461424448085No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2820.21998595834308446No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGGCAGTGTGCCTCTTGTAGAAGG2800.21842577424136048No Hit
CATAGATGTGCCACATACCTTTCCCACATAGAACAGCTAAAAATCTTGGA2770.21608549808877445No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT2740.21374522193618847No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT2670.20828457758015445No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGTCATTCTTCTCTGGGGGCTCT2610.20360402527498245No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT2610.20360402527498245No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT2610.20360402527498245No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2570.20048365707153443No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC2550.19892347296981044No Hit
CATAGATGTGCCACATACCTTTCCCAACACTGACGACATGGTTCTACACA2530.19736328886808646No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGTGTGAGA2490.19424292066463844No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTTCTATGAGCTCGAGGCAGAGGAC2490.19424292066463844No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2480.19346282861377642No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2450.19112255246119042No Hit
CATAGATGCTTCTGATATGTTGCCGTTAGATGCTCAGATCTCAAAAGGCT2420.18878227630860442No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG2380.1856619081051564No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2370.1848818160542944No Hit
CATAGAGAACAGCCCTGAGAGAATGCAACATGAGAACAGCTAAAAATCTT2350.1833216319525704No Hit
CATAGATGTGCCACATACCTTTCCCAGGTGCAAATTGTCAGTGTGTCTAT2240.17474061939308838No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGAGGGTAATGGAGGA2230.17396052734222636No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA2220.17318043529136437No Hit
CATAGAATACAACACACTCTCTGCCCTGTAGACATGTGTGAGAGGGAAGG2210.17240034324050238No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC2210.17240034324050238No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACACATAGAACAGCTAAAAATCT2190.17084015913877837No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTAGAGGTCAT2140.16693969888446838No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA2130.16615960683360637No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC2120.16537951478274437No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2070.16147905452843436No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCCTTGGAGAGAAATGCTGCTCTA2070.16147905452843436No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2040.15913877837584836No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGCAAACTAACACA2030.15835868632498634No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGTT2020.15757859427412435No Hit
CATAGATGCTTCTGATATGTTGCCGTGATGCTCAGATCTCAAAAGGCTTC2010.15679850222326236No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTCATTCTTCTCTGGGGGCTCT1990.15523831812153835No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTCTCCTCAGCAAA1980.15445822607067633No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGGGCTGAGAAAGGA1960.15289804196895235No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA1950.15211794991809033No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACAGTGAAACAAGATC1920.14977767376550433No Hit
CATAGAATACAACACACTCTCTGCCCTGTGAGACCCAGGTGCAAATTGTC1900.14821748966378032No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACTAGAACAGCTAAAAATCTTGGA1880.1466573055620563No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCCCCCACATAGAACAGC1870.14587721351119431No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGTTCTGCAC1850.1443170294094703No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1840.1435369373586083No Hit
CATAGACCTGTGTGTGAGGCATTGTTATAGACATGTGTGAGAGGGAAGGA1820.1419767532568843No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACTGACGACATGGTTCTACACAT1800.14041656915516032No Hit
CATAGACCAAAGCTAGAAACTCCCATCTATGAGACCAAGTCTCTGCTACC1800.14041656915516032No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1780.1388563850534363No Hit
CATAGAATACAACACACTCTCTGCCCTGGGTTCTGCACATCTACAAGGAC1770.13807629300257432No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCACATAGAACAGCTAAAAATCT1710.13339574069740232No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1670.1302753724939543No Hit
CATAGATGCTTCTGATATGTTGCCGTAATTGGGGATGGCTGGTTGAATCT1660.1294952804430923No Hit
CATAGAGAACAGCCCTGAGAGAATGCCGACATGGTTCTACACATAGAGAA1660.1294952804430923No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1650.12871518839223028No Hit
CATAGAAGTGACCCTCAGCTCAGTGAATTGGCCAGGTGACACACTGATGA1640.1279350963413683No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACCGACAGTGAAACAAGATC1620.12637491223964428No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1600.12481472813792027No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA1600.12481472813792027No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC1590.12403463608705828No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGGGCTGAGAAAGG1540.12013417583274827No Hit
CATAGATGATCCATCTACCTCTGCTTCAGGACACTTTGGACTCTGCCTCT1500.11701380762930025No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGACCACACGCACAACTGGCATC1480.11545362352757625No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCGGTCATTCTTCT1470.11467353147671426No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC1420.11077307122240425No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGAGAGGAGGGGGCAGAATATC1380.10765270301895623No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1380.10765270301895623No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1370.10687261096809424No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA1330.10375224276464622No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1310.10219205866292222No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)