FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61837
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2797245.23505344696541No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC27044.3727865193977715No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT14802.393389071268011No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA11981.9373514239047818No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA10711.7319727671135405No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA7531.2177175477464948No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA6441.0414476769571615No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA6411.0365962126235102No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA5300.8570920322784094No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC3600.5821757200381649No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT3300.5336610767016512No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA3020.488380742920905No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA2290.37032844413538824No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA2190.3541568963565503No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA2150.3476882772450151No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC2100.33960250335559616No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA2090.3379853485777124No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1990.3218138007988745No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT1950.31534518168733927No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1790.28947070524119867No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1460.23610459757103355No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1400.22640166890373079No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1380.22316735934796317No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1370.2215502045700794No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1360.2199330497921956No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT1300.21023012112489284No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATACCTGATTGGCCATTTGAA1250.2021443472354739No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1250.2021443472354739No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1230.19891003767970633No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1200.19405857334605495No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1190.19244141856817118No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1130.1827384899008684No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1130.1827384899008684No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1120.18112133512298462No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1060.17141840645568188No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA1040.1681840968999143No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCCGTCTCTA1020.16494978734414673No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1000.16171547778837914No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC920.1487782395653088No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA860.13907531089800604No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA850.13745815612012227No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG840.13584100134223848No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG830.13422384656435465No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGCCTTCCTAACCATGGGCATA790.1277552274528195No Hit
CATAGATCATGGGACTTCAGCATGGCCATAGAGCAGAATTACCTCTGGAT760.12290376311916813No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAAAAATTAGCTGA730.11805229878551678No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGTACCATGTTTTCATCCTG720.11643514400763297No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCGTCTCTA700.11320083445186539No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGACAAAACCCCGTCTCTA690.11158367967398158No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGT680.1099665248960978No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCTGTCTCTA680.1099665248960978No Hit
CATAGATCATGGGACTTCAGCATGGCCAACCTGGTGAAACCCCGTCTCTA680.1099665248960978No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA670.10834937011821402No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCACCTCTA670.10834937011821402No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGTGAAACCCCATCTCTA660.10673221534033023No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA660.10673221534033023No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG660.10673221534033023No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG650.10511506056244642No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCGTCTCTA620.10026359622879505No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT620.10026359622879505No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA620.10026359622879505No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTTTCTA620.10026359622879505No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)