FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48353
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG764715.814944264058074No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA33296.884784811697308No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA25885.3523049242032545No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC21084.3596054019399No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA10402.1508489649039357No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA10262.1218952288379214No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA9742.0143527805927244No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA8861.832357868177776No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC8701.7992678841023309No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT7651.582114863607222No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT7541.5593654995553534No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC6861.4187330672347114No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT5611.160217566645296No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT5441.1250594585651357No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT4881.0092445143010775No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA4490.9285876781171799No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA3940.8148408578578372No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG3810.7879552457965379No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA3670.7590015097305235No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG3260.6742084255371953No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG3050.6307778214381734No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2940.608028457386305No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA2730.5645978532872831No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA2630.5439166132401299No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA2620.5418484892354146No Hit
CATAGACAGAAACCACCCAGACAACCACACTGACTGATACAGGAAGGCCT2310.4777366450892395No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAATGAAACCCCATCTCTA2260.46739602506566297No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTAATAAATGGGGGCAAGG2120.43844228899964843No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCACTA1940.40121605691477263No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCCCTA1740.35985357682046615No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1650.3412404607780283No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA1570.32469546874030564No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTGGTCTCTA1530.3164229727214444No Hit
CATAGATCATGGGACTTCAGCATGGCCAGCATGGTGAAACCCCGTCTCTA1530.3164229727214444No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGCTTCCTTCTGCTGGCTATT1500.3102186007072984No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT1500.3102186007072984No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACACTGTCTCTACCAAAAATA1490.3081504767025831No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTAAAACCCCATCTCTA1480.30608235269786777No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1450.2998779806837218No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCCTGTCTA1390.28746923665542984No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1380.28540111265071455No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT1300.26885612061299197No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1300.26885612061299197No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA1290.2667879966082766No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1280.2647198726035613No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1270.262651748598846No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG1260.26058362459413065No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA1210.25024300457055404No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA1200.24817488056583875No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGTGAAACCCTGTCTTTA1160.23990238454697743No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCGGCTCCA1150.23783426054226212No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCTACTAAAAATA1140.23576613653754677No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC1130.23369801253283148No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTGTAATTTTTGTATTTTT1120.23162988852811614No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1110.22956176452340082No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTTGGAGACAGCCGCTCA1080.22335739250925485No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCCTCTCTA1030.21301677248567824No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC1010.20888052447624758No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1000.2068124004715323No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCCACTAAAAACA980.2026761524621016No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA890.18406303641966373No Hit
CATAGATCATGGGACTTCAGCATGGCCTACATGGTGAAACCTCATCTCTA890.18406303641966373No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCCGTCTCTA890.18406303641966373No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA890.18406303641966373No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT880.18199491241494842No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG860.17785866440551776No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTTTCTA840.1737224163960871No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTCATCTCTACTAAAAATA830.17165429239137178No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGCACTGGTACCAAAACAG830.17165429239137178No Hit
CATAGACACCATGCCTGGCTAATTTTGGGAAACCCCGTCTCTACTAAAAA810.16751804438194115No Hit
CATAGATCATGGGACTTCAGCATGGCCAACAGGGTGAAACCCTGTCTTTA810.16751804438194115No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCTGTCTCTA780.16131367236779517No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAATGAAACCCCATCTCTA760.15717742435836451No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCTGTTTCTA750.1551093003536492No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT750.1551093003536492No Hit
CATAGATCATGGGACTTCAGCATGGCCAAAATGGAGAAACCCCGTCTTTA710.1468368043347879No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACCCCGTCTCTA710.1468368043347879No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTTGTCTCTA700.1447686803300726No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG700.1447686803300726No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG700.1447686803300726No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACACCGCCTCTA690.14270055632535728No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC680.14063243232064196No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAACCCTCGTCTCTA660.1364961843112113No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA650.13442806030649598No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAAGCCTACCTCTA650.13442806030649598No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCGCCTCTA650.13442806030649598No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGTGAAACCCCATCTCTA630.13029181229706532No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATCGTGAAACCCCGTCTCTA620.12822368829235No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGTGAAACCTCATCTCTA620.12822368829235No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA590.12201931627820405No Hit
CATAGATCATGGGACTTCAGCATGGCAAGCAATGGGGAAAGGATTCTATG590.12201931627820405No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA570.11788306826877339No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAGATATACAATCA570.11788306826877339No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAGACCGCCCCGTCT560.11581494426405807No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA560.11581494426405807No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC500.10340620023576615No Hit
CATAGATTGGAACTTTGCCAGCCTTACCAACATGGAGAAACCCCATCTCT490.1013380762310508No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACACCATCTCTA490.1013380762310508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)