FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48353
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA740715.318594502926395No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA495510.247554443364425No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG30756.359481314499617No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA9732.012284656588009No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT9591.9833309205219947No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT8971.8551072322296445No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA8961.8530391082249291No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA8611.780654768059893No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT7361.5221392674704775No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA6711.3877112071639817No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG5901.2201931627820404No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC5441.1250594585651357No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT4700.9720182822162017No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT4500.9306558021218951No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT3810.7879552457965379No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA3720.7693421297541No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG3090.6390503174570348No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC2970.6142328294004508No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCAC2860.5914834653485823No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG2780.5749384733108597No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA2420.5004860091411081No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTGGGATTACAGGTGCCCACCAC2230.461191653051517No Hit
CATAGACTTCCTTGCCCCCATTTATTACGGGAGCAGGAATTAGACTCTTG2150.4446466610137944No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGGTTGTCTGGGTGGTTTCT2140.442578537009079No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCAC1940.40121605691477263No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACTCACCAT1920.39707980890534195No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCAC1850.3826029408723347No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT1820.37639856885818873No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG1710.35364920480632017No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT1660.34330858478274356No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGTGTGCCAC1650.3412404607780283No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA1620.3350360887638823No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGTCTACAGGCCCACGCCAC1590.3288317167497363No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT1560.32262734473559035No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG1500.3102186007072984No Hit
CATAGAATAGCCAGCAGAAGGAAGCATGCAAGACTAGGCAATTTACAAAT1460.30194610468843713No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGGATTATAGGTGCCCAACCA1460.30194610468843713No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGTTGGGATTACAGGCAACTACCAA1450.2998779806837218No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCGCGTCAC1430.29574173267429116No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGTGAAATTCCTGAGGTCAGG1410.29160548466486047No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAAGTACAGGCGTGTGCCAC1400.2895373606601452No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC1390.28746923665542984No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGTGCAACCA1390.28746923665542984No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT1380.28540111265071455No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT1360.2812648646412839No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCACC1350.2791967406365686No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCACCAC1320.2729923686224226No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAATAGAGCAGGAATTAGACTCT1290.2667879966082766No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG1260.26058362459413065No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCACCAC1230.25437925257998467No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACACACCCTGCTAATTTT1200.24817488056583875No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACCGCTGCCCACCAC1190.2461067565611234No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA1110.22956176452340082No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG1080.22335739250925485No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATGA1080.22335739250925485No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGTGTGTGCTAC1040.21508489649039358No Hit
CATAGAGGTGAGCGGCTGTCTCCAACACTGACGCCATGCTGAAGTCCCAT1020.21094864848096292No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCAGGCA1010.20888052447624758No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGTCACCCGCACC1010.20888052447624758No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCCCATGCCAT990.20474427646681695No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCGCCCACCAC930.192335532438525No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC920.19026740843380968No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC890.18406303641966373No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACTGGCATATGCGCC870.17992678841023307No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCGCATGACAC860.17785866440551776No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG860.17785866440551776No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGAATGCCAC860.17785866440551776No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAGAAGTCAAATTGTCC840.1737224163960871No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGCTTGTCAAAGATCA780.16131367236779517No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT780.16131367236779517No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGAATACAGATGCCGCCAAC770.15924554836307986No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAC730.15097305234421857No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACTATGTCGTCAGTGT730.15097305234421857No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATCACAGGCACCTGGCTA720.14890492833950325No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGCACCTGCCAC710.1468368043347879No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGAACACACCAC710.1468368043347879No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG700.1447686803300726No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAGCAGGAATTAGACTCTTGACA690.14270055632535728No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA660.1364961843112113No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGCAACTATAGGCGCGGGCCGC640.13235993630178064No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTGCAGGTGTGTGCCAC640.13235993630178064No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGGATTACAGGCACGTACCAC620.12822368829235No Hit
CATAGAATCCTTTCCCCATTGCTTGCCATGCTGAAGTCCCATGATCTATG590.12201931627820405No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGCGCCTGCCAC580.11995119227348872No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACATACCAC570.11788306826877339No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCCGGGACTACAGGCATGCACCAC570.11788306826877339No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGACACACACCAC560.11581494426405807No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCTTCTCAGGTTTGTCAAAGAAAG560.11581494426405807No Hit
CATAGACTGCCTCAGCCTCCTGAGTATCTGGGATTACAGATGTGCACCAC560.11581494426405807No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGGATTACAGGCGTACGCCAT550.11374682025934275No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG540.11167869625462742No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAAAGGCACCTGCCAC540.11167869625462742No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCGCCAC520.10754244824519679No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGGTTACAGGTGCCCACCAT520.10754244824519679No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA510.10547432424048146No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAT510.10547432424048146No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCGCCAC500.10340620023576615No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA490.1013380762310508No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAGGATCA490.1013380762310508No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCAC490.1013380762310508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)