FastQCFastQC Report
Wed 8 May 2024
EGAF00005807233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125085
Total Bases18.7 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4172633.35811648079306No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC78026.237358596154615No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA31902.550265819242915No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT30722.455929967622017No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT30412.4311468201622897No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG27542.201702842067394No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA22101.7667985769676617No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT15441.2343606347683576No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA14041.12243674301475No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA13661.0920574009673423No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA13401.071271535355958No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG11100.887396570332174No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG9300.7434944237918215No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC7750.6195786864931847No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT5800.4636846944078027No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT5780.4620857816684655No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT5650.4516928488627733No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC5450.43570372146940084No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT5380.43010752688172044No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTAATCTGTGAGTTGCTGATGC5160.41251948674901073No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC4780.3821401447016029No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG4670.3733461246352481No Hit
CATAGAAACCCCAAAGGCTATGTTCAGTGTACCTGATTGGCCATTTGAAC4610.3685493864172363No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC4480.35815645361154413No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTGACTGATACAGGAAGGCCT4280.34216732621817164No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTAATAAATGGGGGCAAGGAAG4230.3381700443698285No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT4210.3365711316304913No Hit
CNTAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC4210.3365711316304913No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT4010.32058200423711875No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGACTGATACAGGAAGGCCT3980.3181836351281129No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA3840.3069912459527521No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG3650.29180157492904824No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG3650.29180157492904824No Hit
CATAGAGCCAAGGAAAGTTGAATGGACACTGACTGATACAGGAAGGCCTT3590.2870048367110365No Hit
CATAGAGGATCCCATCTGAGTTGGTCTAGACCACCTGATTGGCCATTTGA2870.2294439780948955No Hit
CATAGATGCCCTTTTTGTGTACTTCCAATGGGCAAGCAATGACAGTCTAT2760.2206499580285406No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTGCTTCTTTCAAAAGTCTGG2700.21585321981052885No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG2580.20625974337450537No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC2540.20306191789583083No Hit
CATAGAACTTCACAAGGGCTTTAGGGTACGGTTGCACAGATCATTTAAGC2540.20306191789583083No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACTGATACAGGAAGGCCTTT2480.1982651796778191No Hit
CATAGACAGAAACCACCCAGACAACCTGATTGGCCATTTGAACTCTATGA2410.1926689850901387No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT2370.1894711596114642No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2330.1862733341327897No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2320.18547387776312108No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA2270.18147659591477794No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2260.18067713954510933No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA2210.1766798576967662No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2120.16948475036974855No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT2050.16388855578206818No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTATACGTGAATGTGGATCAGA1980.1582923611943878No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1940.1550945357157133No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACTGATACAGGAAGGCCTT1940.1550945357157133No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1920.15349562297637606No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTAGACCTGCG1910.15269616660670743No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC1900.15189671023703882No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1900.15189671023703882No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1820.14550105927968982No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGCCCTGCG1770.1415037774313467No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1770.1415037774313467No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1720.13750649558300357No Hit
CNTAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT1710.13670703921333494No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTTCTTTCAAAAGTCTGGTCT1680.13430867010432906No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1670.13350921373466043No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1670.13350921373466043No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCCGATTTGGACCTGCG1640.13111084462565453No Hit
CNTAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA1610.1287124755166487No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG1580.1263141064076428No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA1550.12391573729863693No Hit
CNTAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT1540.12311628092896831No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1530.12231682455929968No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1530.12231682455929968No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCGTCCAATGGGCAAGCAATG1450.11592117360195067No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1430.11432226086261342No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1430.11432226086261342No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA1400.11192389175360754No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACATACGTGAATGTGGATCA1400.11192389175360754No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1330.10632769716592716No Hit
CNTAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA1320.10552824079625854No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1320.10552824079625854No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGTGTATGATCTATCCAGGAAT1310.10472878442658992No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA1300.1039293280569213No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1290.10312987168725268No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1280.10233041531758404No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)