FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807235
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97716
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1802018.441196938065413No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA95079.729215276924966No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG59326.070653731221089No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG50335.150640632035695No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG43204.420975070612796No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA37413.8284416062876088No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC28832.9503868353186786No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT23292.3834377174669448No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA19491.9945556510704492No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT17981.8400261983707886No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG17601.8011379917311392No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA17261.766343280527242No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA13861.4183961684882722No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC10501.0745425518850547No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA9931.0162102419255803No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA9520.9742519137091163No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC7640.7818576282287446No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT7560.7736706373572394No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT7110.7276188137050227No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG7020.7184084489745793No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6390.653935895861476No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT5800.5935568381841254No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC5350.5475050145319088No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT5350.5475050145319088No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG5170.5290842850710221No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA4970.5086168078922592No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACATAGAAATGATGCTGAAG4840.49531294772606327No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA4660.47689221826517664No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT4360.4461910024970322No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCATCTATGAGACCAGAGATC3610.36943796307667115No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC3510.35920422448728967No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGGCTCAGGTATGTCTTT3470.3551107290515371No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC3400.3479471120389701No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA3150.3223627655655164No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA3040.31110565311719673No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT2480.2537967170166605No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCATCTATGAGAGATCCCACC2420.24765647386303163No Hit
CATAGAGTCCAACTATTCCAGCACCATCTACAAAGGATTCTGGGCCATCT2350.24049285685046462No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATGGGCTGCTGAAGTGATGGGCTA2110.21593188423594906No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG2020.20672151950550574No Hit
CATAGATGGCCAAGATACGAGCACATGAGTGTCTGTTTCCCCACTCAAAT2000.20467477178762947No Hit
CATAGACATTTAATCCTCACAATGACCCATGCATCTAGGCTAATCTGAAA1990.2036513979286913No Hit
CATAGAAAAAACAGTTGGCCAGGCATACTGTGTGCTTGAACCAGATTCTA1800.1842072946088665No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1770.18113717303205207No Hit
CATAGATGTGTAGCCTGGGTCTGACACACTGACGACATGGTTCTACACAT1760.18011379917311393No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1760.18011379917311393No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1700.17397355601948505No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG1640.16783331286585615No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT1600.16373981743010357No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGACGACATGGTTCTACACATAGAG1580.16169306971222727No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTAGAGATCCCACCATTTGC1560.15964632199435097No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA1560.15964632199435097No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA1500.1535060788407221No Hit
CATAGAAATGATGCTGAAGGGCCTGCGACATGGTTCTACACATAGAAATG1500.1535060788407221No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG1450.14838920954603135No Hit
CATAGAAGGACAAAGACATTTAGGACCCAAGCTCTATGTGTGCAGAAGTA1430.14634246182815505No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG1420.14531908796921691No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1390.14224896639240248No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGACATGGTTCTAC1330.1361087232387736No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1290.132015227803021No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA1290.132015227803021No Hit
CATAGAAATGATGCTGAAGGGCCTGCAATGATGCTGAAGTGATGGGCTAG1280.13099185394408286No Hit
CATAGAAATGATGCTGAAGGGCCTGCCTACACATAGAAATGATGCTGAAG1240.12689835850833026No Hit
CATAGAAATGATGCTGAAGGGCCTGCTCTATGATAGGCTTAGAGGGCTTG1230.12587498464939212No Hit
CATAGAAATGATGCTGAAGGGCCTGCGGTTCTACACATAGAAATGATGCT1190.12178148921363954No Hit
CATAGATCCACGTGAGAATAAAGCATACACTGACGACATGGTTCTACACA1170.11973474149576324No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT1170.11973474149576324No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT1150.11768799377788694No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1120.1146178722010725No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC1120.1146178722010725No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1090.11154775062425805No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAC1000.10233738589381473No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)