FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807236

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807236
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97716
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1888419.325391952187974No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT95509.773220352859306No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG59266.064513488067461No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG49875.1035654345245405No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG43224.423021818330673No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC37683.8560727004789386No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG29393.0076957714192147No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT22402.29235744402145No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT19171.9618076875844284No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG17711.8123951041794588No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG17361.7765770191166235No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA17281.7683900282451186No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT14111.4439805149617257No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT12511.2802406975316223No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC10511.0755659257439927No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA9911.014163494207704No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA9360.9578779319661059No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC7890.8074419747021981No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT7550.7726472634983013No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT7080.7245486921282083No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6340.6488190265667854No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT6000.6140243153628884No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT5400.5526218838265995No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG5360.5485283883908469No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG5180.5301076589299603No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA4980.5096401817511973No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT4950.506570060174383No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTACCCTGGGAG4800.4912194522903107No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG4690.4799623398419911No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG4300.4400507593434033No Hit
CATAGATGGCAAATGGTGGGATCTCTGGTCTCATAGATGGCAAATGATGG3700.3786483278071145No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC3500.3581808506283516No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACCCTGGGAGAAGAAA3460.354087355192599No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG3340.34180686888534123No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2920.298825166809939No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT2910.2978017929510009No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT2520.2578902124524131No Hit
CATAGATGGCAAATGGTGGGATCTCTCATAGATGGCAAATGATGGGAGTG2360.24151623070940276No Hit
CATAGATGGCCCAGAATCCTTTGTAGATGGTGCTGGAATAGTTGGACTCT2330.23844610913258832No Hit
CATAGATCTAGCCCATCACTTCAGCAGCCCATCACTCTCCCACCATTCAG2130.21797863195382539No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCATGTGCTCGTATCTTG2090.21388513651807278No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG1970.20160465021081503No Hit
CATAGAACACGAAGATTTCAGATTAGCCTAGATGCATGGGTCATTGTGAG1950.1995579024929387No Hit
CATAGAATCTGGTTCAAGCACACAGTATGCCTGGCCAACTGTTTTTTCTA1780.18216054689099023No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG1740.17806705145523763No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1670.17090343444267062No Hit
CATAGATGGCAAATGGTGGGATCTCTACACTGACGAATGAGGAAACAGGC1660.16988006058373245No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1650.1688566867247943No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC1580.16169306971222727No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC1560.15964632199435097No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGAGACAGTTGTGGAAAGTGC1510.15452945269966023No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG1450.14838920954603135No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCACACATAGAGCTTGGGTCCTA1430.14634246182815505No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG1410.14429571411027875No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1390.14224896639240248No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1370.14020221867452617No Hit
CATAGAGCAAGCCCTCTAAGCCTATCATAGAGCAGGCCCTTCAGCATCAT1310.1340619755208973No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTGCAGGCCCTTCAGCATCAT1300.13303860166195913No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1270.1299684800851447No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC1210.12382823693151582No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCGCAG1210.12382823693151582No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT1200.12280486307257768No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGGCAGGCCC1190.12178148921363954No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1130.11564124606001064No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT1100.1125711244831962No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)