FastQCFastQC Report
Wed 8 May 2024
EGAF00005807238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92476
Total Bases13.8 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG64757.001816687572992No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG57766.245944893810286No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT38604.174055971279034No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA35303.817206626584195No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA27132.933734158051819No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT22972.4838877114062026No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTCCTATGTAATGTCTTAT22582.4417146070331763No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT19592.1183874735066395No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA15381.6631342186080713No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA13911.504174055971279No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT13851.4976858860677364No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT13211.4284787404299493No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTACGGTAGCAGAGGCACT12421.3430511700333059No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG11051.194904623902418No Hit
CATAGAGGGACGGAGGCAAGAGGATAGGGATAGTTTGAGGGTAATGCTCT9931.0737921190362905No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA9871.0673039491327478No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT9451.0218867598079502No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCATCCTACATGTGTCTATGTGTA8680.9386219127124876No Hit
CATAGACTCAAGAAACTTACAATCATGGCATACGGTAGGGATAGTTTGAG8650.9353778277607163No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGCTCTTTGACTTATGATGGAGT8460.9148319563994983No Hit
CATAGACATGAGTGGCCGAACAGACCTACGGTAGCAGAGGCACTTGGTCC8430.911587871447727No Hit
CATAGACCATCTGCGCATCCTGTCTGCCATGCTGAAGTCCCATGATCTAT7780.8412993641593494No Hit
CATAGAGCCTGGCATTTGAGGTAAGGACACCTCTATGTGCTCTTTGACTT7320.79155672823219No Hit
CATAGACTCAAGAAACTTACAATCATGGCAAGGCTTGTGAGGGCTGAAGT7300.7893940049310091No Hit
CATAGACTCAAGAAACTTACAATCATGGCATACGGTAGCATTTTAACACA7240.7829058350274665No Hit
CATAGAGCCTGGCATTTGAGGTAAGGAACACAGGTGGATTTGGAAGCTGC7150.7731735801721528No Hit
CATAGACCATCCTCCCACCTTGACCTCGCTGACTTCTCTTAAACAGTTCT7020.7591158787144773No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGCCATGC7010.7580345170638868No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAGGCACTTGGTCCAGACTTTCTATG6710.7255936675461742No Hit
CATAGACCATCTGCGCATCCTGTCTGGGGTTCATACACACGATCCGACAT6230.6736883083178338No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTTAGGGATAGTTTGAG6140.66395605346252No Hit
CATAGACCATCTGCGCATCCTGTCTGACACTCTTGGTCTTTGTGGATCTA5940.6423288204507115No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAGGCTTGTGAGGGCTG5880.635840650547169No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTTACGGTAGCAGAGGCAC5740.620701587438903No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC5600.6055625243306371No Hit
CATAGAGCCTGGCATTTGAGGTAAGGTACGGTAGCAGAGGCACTTGGTCC5550.600155716077685No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT5490.5936675461741424No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGATGGGTTTTTGCCAGA5420.5860980146200095No Hit
CATAGACCATCCTCCCACCTTGACCTGTAGGATGGGTTTTTGCCAGATAG5380.5817725680176478No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTGCTCTTTG5040.5450062718975734No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT5030.543924910246983No Hit
CATAGAAGGTGATAATCATGACAGCCAATGTACTCCTATGTAATGTCTTA4640.5017518058739565No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT4590.4963449976210043No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT4540.4909381893680523No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACATGCCTAGCCATTTT4440.480124572862148No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCATTTTAACACAGCATTGAAGT4430.47904321121155763No Hit
CATAGACCATCTGCGCATCCTGTCTGTGTAGCATTTTAACACAGCATTGA4310.4660668714044725No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTGAGGCACT3960.42821921363380766No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACAATAGAGGCACTTG3840.4152428738267226No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATAGGATGGGTTTTTGCCAGA3820.4130801505255417No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGCATTTTAACACAGCATTGAA3750.40551061897140883No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTCTTTTGCAAGTTTGTCTGC3620.39145291751373323No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTAGGATGGGTTTTTGCCAGAT3500.3784765777066482No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTGCCATGCT3450.3730697694536961No Hit
CATAGAAGCAGCATTGATCATCCTCCAGTGTAGCATTTTAACACAGCATT3380.36550023789956315No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT3340.3611747912972014No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTACACTGACACTCTTGGT3310.35793070634543017No Hit
CATAGACATGAGTGGCCGAACAGACCGTAGATGGGTTTTTGCCAGATAGC3300.35684934469483975No Hit
CATAGACCATCCTCCCACCTTGACCTACGGTAGCAGAGGCACTTGGTCCA3150.34062891993598343No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGTGTACTCCTATGTAATGTCTTAT3150.34062891993598343No Hit
CATAGACCATCTGCGCATCCTGTCTGTACGGTAGCAGAGGCACTTGGTCC3070.33197802673126No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTGATGGGTT3060.33089666508066956No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG2990.3233271335265366No Hit
CATAGAACATCGCACACACATGGAACTTCAATGCTGTTTGTCTTCCATGC2930.3168389636229941No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2850.3081880704182707No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGATGGG2820.3049439854664994No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGGTTGGGAGTTCGAGAC2800.30278126216531853No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAGTCGTCAGTGTAGTCTTTTG2800.30278126216531853No Hit
CATAGAGGGACGGAGGCAAGAGGATAGCATTTTAACACAGCATTGAAGTT2780.3006185388641377No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTTAAAGTGGGGAAAGG2680.28980492235823346No Hit
CATAGACATGAGTGGCCGAACAGACCTACGGTAGCATTTTAACACAGCAT2670.28872356070764305No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGCTATATAGAAGTACATGG2660.2876421990570526No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGGCACTTGGTCCAGACT2540.27466585924996756No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACATGCCT2520.2725031359487867No Hit
CATAGACCATCTGCGCATCCTGTCTGACACTGACACTCTTGGTCTTTGTG2400.25952679614170165No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTGGTTGGGA2400.25952679614170165No Hit
CATAGAGATGTCAAGAGCAATGCCCATACGGTAGCAGAGGCACTTGGTCC2370.2562827111899304No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAGTACGGTAGCAGAGGCACTT2350.2541199878887495No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATACATGCCTAGCCATTTTTGGTTC2300.2487131796357974No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGAGGCACTTGGTCCA2290.24763181798520698No Hit
CATAGACCATCCTCCCACCTTGACCTGCTACCGTGCTGTTTGTCTTCCAT2280.24655045633461656No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACCAAGGCTTCCCTGC2190.23681820147930274No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG2100.22708594662398893No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAACATAGAGGGTTGGGAGTTC2080.2249232233228081No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTTAGCAAAGGCTTGTGAG2050.2216791383710368No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATGCCCGGCCACATTATTTTCTATG2040.2205977767204464No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGCTGAAGTCCCATGATCTA1930.20870279856395174No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAGTCGTCAGTGTTAAAGTGGG1890.20437735196159001No Hit
CATAGACATGAGTGGCCGAACAGACCACACTGACACTCTTGGTCTTTGTG1840.19897054370863793No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAACACTGACACTCTTGGTCTT1790.1935637354556858No Hit
CATAGAAGGTGATAATCATGACAGCCATGCTGAAGTCCCATGATCTATGT1790.1935637354556858No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1750.1892382888533241No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTGTAGAACCATGATGGGTTTT1700.183831480600372No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1690.18275011894978158No Hit
CATAGAGATGTCAAGAGCAATGCCCACCTCAGTCTTTTGCAAGTTTGTCT1600.17301786409446776No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1580.17085514079328692No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACTGCTCTTTGACTTA1530.16544833254033478No Hit
CATAGACTCAAGAAACTTACAATCATGGCACCCAGTACAGGAGCACCCTC1500.1622042475885635No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTTCTATGTGTAGAACCATGTCGT1490.16112288593797308No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCCGGCCACATTATTTTCTATG1450.15679743933561138No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACTTGGTCTCATAGAC1440.15571607768502096No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1440.15571607768502096No Hit
CATAGACATGAGTGGCCGAACAGACACTCTTGGTCTTTGTGGATCTATGT1440.15571607768502096No Hit
CATAGAACATCGCACACACATGGAACTCCTATGTAATGTCTTATTTTGTT1330.1438210995285263No Hit
CATAGAGATGTCAAGAGCAATGCCCAGTGTAAAGTGGGGAAAGGACACCT1300.14057701457675506No Hit
CATAGAGATGTCAAGAGCAATGCCCAGAGGCACTTGGTCCAGACTTTCTA1260.13625156797439336No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTCACCCAGTACAGGAGCA1230.13300748302262208No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATACGGTTGGGAGTTCGAGAC1230.13300748302262208No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1230.13300748302262208No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATTTGAGGCACTTGGTCCAGACTTT1230.13300748302262208No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTACATGCCCGGCCACATT1170.12651931311907955No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGGGTTGAAGGCATGACTTCTAA1150.1243565898178987No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTTTGACT1150.1243565898178987No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAAGGAGTTGTGATCCTTTGGAGGAA1140.12327522816730828No Hit
CATAGATGACATAGACCTTATACCCTCATCAAAAACTAATCCCAGAGCAC1140.12327522816730828No Hit
CATAGAGGTGAGCGGCTGTCTCCATAACCATGTCGTCAGATGGGTTTTTG1130.12219386651671786No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTAGTCTTTTGCAAGTT1120.12111250486612742No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1120.12111250486612742No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1120.12111250486612742No Hit
CATAGACATGAGTGGCCGAACAGACCAAGTCGTCAGTGTACTCCTATGTA1100.11894978156494658No Hit
CATAGAGATCAATCCCTGTCTACATAACCAATAGTTGTTACTACCCCCAC1100.11894978156494658No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG1090.11786841991435616No Hit
CATAGAGATCAATCCCTGTCTACATAACCACCCCATCCTACATGTGTCTA1090.11786841991435616No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG1070.1157056966131753No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGGTTGGGAGTTCGAG1060.11462433496258488No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGTTGGGAGTTCGAGACCA1050.11354297331199446No Hit
CATAGACCATCCTCCCACCTTGACCTACGGTAGCATTTTAACACAGCATT1050.11354297331199446No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAACACTGACGACACTCTTGGT1040.11246161166140405No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG1020.1102988883602232No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCAAGCTATATAGAAGTA1010.10921752670963276No Hit
CATAGAGGGACGGAGGCACTTGGTCCAGACTTTCTATGTGTAGAACCATG1000.10813616505904235No Hit
CATAGACATGAGTGGCCGAACAGACCGTCTGGAGCACCTAGAGTCCCAGG1000.10813616505904235No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGACCAAGGGTTGGGA990.10705480340845192No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTCACCCAGTACAGGAGCACCCTC980.1059734417578615No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)