FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807242

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807242
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140266
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG106237.573467554503586No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG71375.088189582650108No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT68104.855061098199136No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT66624.749547288722855No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT44543.1753953203199634No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT43333.089130651761653No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT40402.880241826244421No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT40342.8759642393737614No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT35982.565126260105799No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT30262.157329645102876No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT23911.7046183679580225No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT20761.480045057248371No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG20261.4443984999928707No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG18171.2953958906648795No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT16461.1734846648510686No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT14191.0116492949110976No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC14121.0066587768953275No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13480.9610311836082871No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG13130.936078593529437No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT13090.933226868948997No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT12860.9168294526114668No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG12280.8754794461950864No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG11560.8241484037471661No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA11180.797057020232986No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT10840.7728173612992457No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC10630.7578458072519356No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT10040.7157828696904454No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT9610.6851268304507151No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC9510.677997518999615No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT9410.670868207548515No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC8420.6002880241826244No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG8370.5967233684570744No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG7500.5346983588325039No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT7410.5282819785265138No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA7070.5040423195927737No Hit
CATAGAGGCCATTCTTCTCATGCTGGCATTCTTTCTCCAGACCTTCATCT6780.4833673163845835No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC6610.4712474869177135No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG6540.46625696890194346No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG6260.44629489683886325No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTAGAATCTTGAACTCAGGAGTC5960.4249069624855631No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT5790.4127871330186931No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG5790.4127871330186931No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC5780.41207420187358307No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC5500.3921121298105029No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5430.38712161179473287No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT5050.36003022828055264No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4800.3422069496528026No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4740.3379293627821425No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC4620.32937418904082244No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC4590.3272353956054924No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG4500.3208190152995024No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT4500.3208190152995024No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG4350.3101250481228523No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT4340.3094121169777423No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4170.29729228751087217No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4080.29087590720488216No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT4070.29016297605977215No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT4050.28873711376955213No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3980.28374659575378214No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3810.271626766286912No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT3790.270200903996692No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA3640.2595069368200419No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT3640.2595069368200419No Hit
CATAGAAGGGGTGATGCTCTGATGGACCAGCTATCTTCTGCTGCACTGCT3570.2545164188042719No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC3430.2445353827727318No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3360.2395448647569618No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT3330.23740607132163175No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA3280.2338414155960817No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTAGGTGGCTTCTGGTGCA3260.23241555330586172No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT3200.2281379664352017No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3120.22243451727432165No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT3100.22100865498410166No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA3050.21744399925855162No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT2980.21245348124278154No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGTGCACAGTTTGGAATGACTCTA2870.2046112386465715No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC2830.20175951406613152No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT2730.19463020261503144No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2720.19391727146992144No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2590.18464916658349137No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2590.18464916658349137No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2520.17965864856772132No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTAGGTGGCTTCTGGTGCAT2490.17751985513239132No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTAGCTGCTGAAGGATAGTTGG2460.1753810616970613No Hit
CATAGAACATCTCCCTGTTCCTCCCAGCTGTCTGGCACAATGAGGCAATC2440.1739551994068413No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2340.16682588795574124No Hit
CATAGAGAAGGAAAACTGGGCTGTGGCGGTAGGTGGCTTCTGGTGCATCT2320.16540002566552123No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGCAGTTAGGCTACTTGGG2290.1632612322301912No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2260.16112243879486118No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGTGGTAGGTGGCTTCTGGTG2250.1604095076497512No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2210.15755778306931117No Hit
CATAGAAGGGGTGATGCTCTGATGGAGACTTGGTCTCATAGACTGGCTAA2180.15541898963398115No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2170.15470605848887115No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTAGAATCTTGAACTCAGGAGTC2170.15470605848887115No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2120.15114140276332114No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT2070.1475767470377711No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA2060.14686381589266106No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGTGTAGAACCATGTCGT2010.14329916016711106No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2010.14329916016711106No Hit
CATAGACTCAGAACTGGCTCTAATTCCTTACGGTAGGTGGCTTCTGGTGC1990.14187329787689107No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC1990.14187329787689107No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1960.13973450444156105No Hit
CATAGAACTGTCCCCTACTTTTCACCATGTCAAGAAAGAAAACCCACAAA1860.13260519299046097No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG1850.13189226184535097No Hit
CATAGATGGCCCACTGACATTTTCCTACACTGACAGGGGTGTGGTGTTCT1750.12476295039425091No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1660.11834657008826088No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1640.11692070779804085No Hit
CATAGACAGGGGCCAGAACTCCTAAGGTCTCATAGACAGGGGTGTGGTGT1610.11478191436271085No Hit
CATAGAACTGACCATACACTTGCCCTGTCTAGGATGAGATAATTGCCCTT1570.11193018978227084No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG1500.1069396717665008No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG1470.10480087833117079No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGCGTGTATGTGAGTGCCAAATCT1420.10123622260562075No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCTGAGAAGGTAGGTGGCTTCTG1420.10123622260562075No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)