FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807243
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103849
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA62456.013538888193435No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC46474.474766247147301No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA40483.897967240897842No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA39953.846931602615336No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT39353.789155408333253No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG35843.45116467178307No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA35383.4068695895001397No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG25942.497857466128706No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA24812.389045633564117No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA24222.3322323758534025No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG22782.1935695095764043No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA21542.0741653747267668No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA20571.9807605273040665No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT17581.6928424924650214No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG15931.5339579581892941No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG12971.248928733064353No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG12571.2104112702096315No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT10521.0130092730791822No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9800.943677839940683No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC9540.918641489085114No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC8910.8579764850889272No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT8340.8030891005209487No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG8050.7751639399512754No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT5340.5142081291105355No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5270.5074675731109592No Hit
CATAGAGAACAGCCCTGAGAGAATGCGGTTCTACACATAGAGAACAGCTA5040.4853200319694942No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG5010.48243122225539004No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT5000.481468285684022No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACTGACGACATGGCTCAC4860.46798717368486936No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA4820.46413542739939717No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA4770.459320744542557No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA4720.4545060616857168No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA4700.4525801885429807No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC4560.43909907654382807No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACATGGCTCACACCTATAATC4550.43813613997246No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTGGTGGAGGGCTTTGCTGTT4510.43428439368698785No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT4410.42465502797330745No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA4300.4140627256882589No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA4230.4073221696886826No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC4210.40539629654594656No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG4130.39769280397500223No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAGGCTGAGAA4110.39576693083226605No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG4050.3899893114040578No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA4020.3871005016899537No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC4010.38613756511858566No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT3920.37747113597627324No Hit
CATAGATGTGCCACATACCTTTCCCAGAGAACAGCTAAAAATCTTGGAGC3790.36495296054848864No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTAACACTGACGACATGGT3750.3611012142630165No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA3710.3572494679775443No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC3690.35532359483480824No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC3680.3543606582634402No Hit
CATAGATGCTTCTGATATGTTGCCGTACCATAGATGCTCAGATCTCAAAA3540.34087954626428757No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAGAACATTAGCTTAGTTAATTAGG3440.3312501805506071No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA3410.328361370836503No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGCTCACACCT3330.32065787826555864No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT3200.3081397028377741No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG3180.30621382969503796No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG3170.30525089312366993No Hit
CATAGACCTGTGTGTGAGGCATTGTTCAGTGTACTCTCAGTTGTGTGTGT3040.2927327176958854No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT3020.2908068445531493No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA2980.28695509826767707No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT2940.28310335198220493No Hit
CATAGATGCTTCTGATATGTTGCCGTACTAGATGCTCAGATCTCAAAAGG2910.28021454226810083No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACTGACGACATGGTTCTAC2890.2782886691253647No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2870.27636279598262864No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGCTCCCTCATTATCCCTGTGCCT2830.27251104969715645No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCCCTCATTATCCCTGTGCCTC2810.2705851765544204No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA2780.2676963668403162No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2620.2522893816984275No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA2570.2474746988415873No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTAATGGAGGAGTATGGGATCTA2440.23495652341380271No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA2440.23495652341380271No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG2360.2272530308428584No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGGCTCACACCTA2330.22436422112875426No Hit
CATAGATGTGCCACATACCTTTCCCACTGACGACATGGCTCACACCTATA2300.2214754114146501No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACTGACGACATGGTTCTACACAT2300.2214754114146501No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACACTGACGACATGGCTCA2260.21762366512917794No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACGACATGGTTCTACACATA2240.21569779198644187No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGGAGAGGAGGGGGCAG2230.2147348554150738No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC2220.21377191884370578No Hit
CATAGAAGTGACCCTCAGCACAGTGAAACAAGATCGTGCCTCTATGAGAC2210.21280898227233774No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG2180.2099201725582336No Hit
CATAGATCGGTAAGGAATTTGGCTCGAGGCAGAGGACAGGTATCTATGAG2170.20895723598686552No Hit
CATAGAGAACAGCCCTGAGAGAATGCTATTGGGAGAGGAGGGGGCAGAAT2080.20029080684455317No Hit
CATAGAGCCTCCACTCTTCTCGCTATCTACGGAGATAGAGAGGTTGGTTC2060.19836493370181704No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT2040.19643906055908095No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC2030.1954761239877129No Hit
CATAGAGAACAGCCCTGAGAGAATGCCGACATGGTTCTACACATAGAGAA2020.19451318741634488No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCGATCTCCCTCATTATCCCTGTG1980.19066144113087272No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCAAAGCTAGAAACTCCCATCTAT1970.18969850455950468No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1960.18873556798813662No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACGGAGATAGAGAGGTTGGTTCTA1900.18295794855992836No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA1890.1819950119885603No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACGGAGAGGAGGGGGCAGAA1850.17814326570308814No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1820.175254455988984No Hit
CATAGATGTGGTCTCAGTGCCCTATGCAGCAACAAAAGTCACTCCTCTAT1770.17043977313214378No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1710.16466215370393553No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAGATGCTCAGATCTCAAAAGGCTT1600.15406985141888704No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAAATTGTCAGTGTGTCTATGAGA1600.15406985141888704No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCGGTCATTCTT1590.15310691484751898No Hit
CATAGACCCCATGTGCAGTGTAAGCTCAAGGGGGGTCAGGAGAGGAGGGG1580.15214397827615095No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACACTGACGACATGGTTCTACAC1510.14540342227657466No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG1500.1444404857052066No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT1500.1444404857052066No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTGACGACATGGTTCTACACATAG1440.13866286627699834No Hit
CATAGACCCTCCTATCCCTTTTCCCCACACGGACTACAAGTACCCACCAC1430.13769992970563028No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC1420.13673699313426224No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAGGAGGGGGCAGAATATCTATGA1420.13673699313426224No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCTCCCTCATTATCCCTGTGCCTC1390.1338481834201581No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTATGAGACCAAGTCAGACCAAA1390.1338481834201581No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCTGACGACATGGCTCACAC1320.12710762742058182No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT1320.12710762742058182No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGTTCTA1290.12421881770647766No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT1290.12421881770647766No Hit
CATAGATGTGGTCTCAGTGCCCTATGCGACATGGTTCTACACATAGATGT1270.12229294456374158No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGACAGCCGCTCACCTCTATG1260.12133000799237355No Hit
CATAGAACATCTACAGAACTCTCTACCCACACTGACGACATGGTTCTACA1230.1184411982782694No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCACTGACGACATGGCTCAC1210.11651532513553332No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGTTCTACACA1210.11651532513553332No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTAATGGAGGAGTATGGGATCT1190.11458945199279724No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTTGTAGAA1190.11458945199279724No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAAGGACACTTTGGACTCTG1170.11266357885006116No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1160.1117006422786931No Hit
CATAGAACATCTACAGAACTCTCTACCCACACTGACGACATGTGTGAGAG1120.10784889599322094No Hit
CATAGAGGCAGGTGGGTAGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG1110.10688595942185289No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1090.1049600862791168No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGCTCACACCT1070.1030342131363807No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)