FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103849
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT62546.0222053173357475No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA46524.479580930004141No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT40493.89893017746921No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT39323.786266598619149No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA39203.774711359762732No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG36123.478126895781375No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT34853.3558339512176336No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG25592.464154686130825No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA25242.430451906132943No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA24582.366898092422652No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG23142.228235226145654No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA21812.100164662153704No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA20321.9566871130198653No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT18061.7390634478906875No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT17381.6735837610376603No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG15951.5358838313320302No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC13061.2575951622066655No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC12991.250854606207089No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT10220.984121175938141No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9710.9350114107983707No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC9440.9090121233714336No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC8830.8502729925179829No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG8170.7867191788076919No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT8150.7847933056649558No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA5590.5382815433947366No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5440.5238374948242159No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG5310.5113193193964314No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG5220.502652890254119No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCGCATTCT5060.48724590511223026No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCTGTTTACTCG5020.48339415882675807No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT5010.48243122225539004No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA4860.46798717368486936No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA4840.4660613005421333No Hit
CATAGAAACAGCAAAGCCCTCCACCACACTGTCTTCAGCTCTTTGAGGCA4710.45354312511434874No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC4640.4468025691147724No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTAGGAAACATTGGAAAGATGG4570.4400620131151961No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT4460.4294697108301476No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT4220.4063592331173146No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG4180.4025074868318424No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGTAGCAGAGACCTTTTTCTG4100.394803994260898No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG4070.39191518454679386No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4060.3909522479754258No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT4050.3899893114040578No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA4010.38613756511858566No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA3990.38421169197584953No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT3980.3832487554044815No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT3750.3611012142630165No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGGGAAAGGTATGTGGCACA3730.3591753411202804No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGGTACGGCAACATATCAGA3720.35821240454891234No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG3700.3562865314061763No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT3570.3437683559783917No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT3420.32932430740787105No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTAGGAGGAGCTGACTTA3350.3225837514082947No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAGTTTCTAGCTT3310.31873200512282257No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGCTTACACTG3290.3168061319800865No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG3230.3110285125518782No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT3220.31006557598051016No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT3070.2956215274099895No Hit
CATAGACCACACACACAACTGAGAGTACACTGAACAATGCCTCACACACA3020.2908068445531493No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT3000.2888809714104132No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT2990.28791803483904516No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC2980.28695509826767707No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTAGTACGGCAACATATCAGAAG2910.28021454226810083No Hit
CATAGAGGCACAGGGATAATGAGGGAGCTCATAGGGCACTGAGACCACAT2880.2773257325539967No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAAACATTGGAAAGATGGGGATC2840.2734739862685245No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAAACATTG2800.2696222399830523No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT2640.25421525484116364No Hit
CATAGATCCCATACTCCTCCATTACCCTAACCTCCCACCCCAGCTGTCTA2520.2426600159847471No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC2450.23591945998517075No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA2380.22917890398559448No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG2380.22917890398559448No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTATATCTAGG2370.22821596741422642No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGGAAAGGTAT2310.22243834798601814No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGGGAAAGGTATGT2300.2214754114146501No Hit
CATAGATATTCTGCCCCCTCCTCTCCATAGAGGAGAATGATATTGTTGCA2290.22051247484328207No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTTCTATGTGTA2270.21858660170054597No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCT2220.21377191884370578No Hit
CATAGATACCTGTCCTCTGCCTCGAGCCAAATTCCTTACCGATCTATGTG2220.21377191884370578No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC2140.2060684262727614No Hit
CATAGATATTCTGCCCCCTCCTCTCCCAATAGCATTCTCTCAGGGCTGTT2130.20510548970139336No Hit
CATAGAACCAACCTCTCTATCTCCGTAGATAGCGAGAAGAGTGGAGGCTC2070.19932787027318513No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT2010.19355025084497685No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC1990.19162437770224075No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGG1990.19162437770224075No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCGGTCACTGACAGGTCTTAAA1980.19066144113087272No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1980.19066144113087272No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG1960.18873556798813662No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAGGAGCTGACTTACTGTTCTA1960.18873556798813662No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1890.1819950119885603No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1810.17429151941761595No Hit
CATAGATATTCTGCCCCCTCCTCTCCGTAAGGAATCTTTGGGAGGCTATT1790.17236564627487988No Hit
CATAGATGGGATTATAGGTGTGAGCCATCTATGTGTAGAACCATGTCGTC1730.16658802684667162No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGGGCACTGAGACCACATCTAT1720.16562509027530356No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTAGGAGGAGCTGACTTACTGTT1620.1559957245616231No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1610.15503278799025508No Hit
CATAGACACACTGACAATTTGCGCCTGGCCAAAAATTTCCATCTATGTGT1580.15214397827615095No Hit
CATAGATATTCTGCCCCCTCCTCTCCTGACCCCCCTTGAGCTTACACTGC1580.15214397827615095No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGCCCCCAGAGGAGAATGATATT1540.14829223199067876No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT1490.14347754913383853No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTGCATTCTCTCAGG1480.1425146125624705No Hit
CATAGATATTCTGCCCCCTCCTCTCACTGAGCTGAGGGTCACTTCTATGT1410.1357740565628942No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGGAAAAGGGATAGGAGG1410.1357740565628942No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGACTTGGTCTCATAGGTCACTG1410.1357740565628942No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTCTTCAGCTC1380.13288524684879008No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGGAGCTGACTTACTGTTC1370.13192231027742204No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGGAGGAGAATGATAT1330.12807056399194985No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGGAGGAGAATGAT1320.12710762742058182No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGGAGGAGCTGACTTACTGTTCTATG1310.12614469084921376No Hit
CATAGACCCCCTTGAGTTCACTGGACCACATCTATGTGTAGAACCATGTC1270.12229294456374158No Hit
CATAGATCCCATACTCCTCCATTACCCTCACTGAGCTGAGGGTCACTTCT1270.12229294456374158No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT1260.12133000799237355No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGTTTCACTGAGCTGAG1210.11651532513553332No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG1190.11458945199279724No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTATATCTAGGAGTAGAACTGCT1180.1136265154214292No Hit
CATAGAAACAGCAAAGCCCTCCACTACCCACCTGCCTCTATGTGTAGAAC1140.10977476913595702No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1110.10688595942185289No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGGGTAGAGAGTTCT1090.1049600862791168No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAGGAGCTG1070.1030342131363807No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)