FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807246

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807246
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136258
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1431210.503603458145577No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG72655.331797032100868No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG65744.824670845014604No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG56034.112052136388322No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG41373.0361520057537903No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG39562.9033157686154207No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC39002.8622172643074166No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA30632.2479414052752866No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA29962.1987699804782106No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT29722.18115633577478No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA28642.1018949346093443No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT28252.07327276196627No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG28032.0571269209881256No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA27642.028504748345051No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC23481.7232015734855937No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC19071.3995508520600626No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG18391.3496455254003434No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT17681.2975384931526956No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT17281.2681824186469786No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG17251.2659807130590497No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC16461.2080024659102584No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT15091.1074579107281775No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT14641.0744323269092457No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT12590.9239824450674455No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT12350.9063688003640152No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT12050.8843517444847275No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT11930.8755449221330125No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT11620.8527939643910817No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA11440.8395837308635089No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG9660.7089491993130679No Hit
CATAGACCAGTACGCCTTACCCCTTGGGTCCTAAATGTCTTTGTCCTTCT8350.6128080553068443No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT8060.5915249012901994No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC7250.5320788504161224No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT6930.5085939908115487No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG6550.4807057200311175No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT6430.4718988976794023No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTTACAAAAATTGGGA6280.46089036973975844No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA6260.45942256601447257No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTTGTCTTTATGGTGTCCTC6160.4520835473880433No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG5420.3977748095524667No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT4320.31704560466174464No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA4140.3038353711341719No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG4090.3001658618209573No Hit
CATAGAGCAACCCCAGCAGTTTGAGAGGCCGAAGAGGGCCAATTGCTTGA4050.2972302543703856No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG3910.2869556282933846No Hit
CATAGATGGTATTTGAGTGGGGAAACAGAGCCCGTTCTCTCTGTTGTGTC3900.2862217264307417No Hit
CATAGACCCTCTCTTACCCTTCCACCCTTCCTTTCAATAGCCTTTTAGGT3790.27814880594166946No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG3670.26934198358995437No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3600.26420467055145386No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG3350.24585712398538068No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA3190.23411469418309383No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC3100.2275095774193075No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGAACTGGCTTGATTGCACC3100.2275095774193075No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTATGAGCATGCCT3090.22677567555666459No Hit
CATAGATCTAGCCCATCACTTCAGCACTGTCATTGTGGGTTTTAACTACT2960.2172349513423065No Hit
CATAGATGGGACAGCGACAATGACAGTTTATGAGCATGCCTTTGATAAAA2920.2142993438917348No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC2840.20842812899059138No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT2830.20769422712794847No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC2700.19815350291359038No Hit
CATAGAAGGAACAGCAGAGAGGGCAGACACTGTCAGACCCAGGCTACACA2700.19815350291359038No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTATGCTTTATTCTCAC2620.19228228801244698No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGAAATGATTTCCCTTGAA2570.18861277869923232No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG2540.18641107311130356No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG2490.18274156379808892No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATTTGTTGTCTTTATGGTGTCCT2300.16879742840787332No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAACATGCTTTTAGTCAC2240.16439401723201572No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT2230.1636601153693728No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2140.15705499860558647No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTCTTGGAGGCTGGAGAA2080.1526515874297289No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA2080.1526515874297289No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACTGTCATTGTGGGTTT2000.14678037252858547No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG1980.14531256880329962No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCTCGTATCTTG1910.14017525576479914No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCAAGCCCGTTCTCTCTGTTGT1890.13870745203951326No Hit
CATAGAACACGAAGATTTCAGATTAGCCTATAGACCATGGAGAGAATAAT1880.13797355017687035No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGACAGTTGTGGAAAGTGCAAT1870.1372396483142274No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGCTGGTGTTTTCCTTGATCTA1850.13577184458894156No Hit
CATAGATGGGACAGCGACAATGACAGTGTAGCAGGCCCTTCAGCATCATT1800.13210233527572693No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAACTGGCTTGATTGCACCTTT1790.13136843341308402No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTACGAATGAGGAAACAGG1750.1284328259625123No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT1710.12549721851194057No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG1590.11669039616022546No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1540.11302088684701082No Hit
CATAGATCTAGCCCATCACTTCAGCAGAGACAGTTGTGGAAAGTGCAATG1490.10935137753379617No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1400.10274626077000984No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT1390.10201235890736692No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTGGTGCTGGAATA1380.10127845704472399No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACCCTGGGAGAAGAAATGTTGGT1380.10127845704472399No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)