FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103138
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3881137.630165409451415No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG52825.121293800539084No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT19911.930423316333456No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA19141.855766061005643No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT14871.4417576450968606No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA14651.4204270007174853No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG13001.2604471678721714No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT12451.2071205569237333No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT11681.13246330159592No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG11431.1082239329829937No Hit
CATAGAACTCCATCATAAGTCAAAGAGCACACTGCCATCACAGTTCATTG11321.097558610793306No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG11051.0713800926913457No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT10741.0413232756113169No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA10260.9947836878744983No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTATCTCTGACTGTGTTAATTTA9120.8842521669995541No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA9100.8823130175105199No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC8810.8541953499195253No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT8540.8280168318175648No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT7250.7029416897748647No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT5140.4983614186817662No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT4840.4692741763462545No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG4670.45279140568946463No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG4210.4081909674416801No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAAATACAAAAATTA4130.4004343694855437No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG3980.38589074831778786No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT3820.37037755240551495No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG3710.3597122302158274No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATGGTATATTTTCTA3630.3519556322596909No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA3580.3471077585371056No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC3560.3451686090480715No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG3400.3296554131357986No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT3170.30735519401190636No Hit
CATAGAAGAGTGAGACTTGAGATGGGACAGAATTGGAGGATGATCAATGC2930.28408540014349704No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATGGAGGATGATCAA2900.2811766759099459No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACACAAGATATGAAAAATAA2650.2569373072970195No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTATGGAGGATGATCAA2410.2336675134286102No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT2220.21524559328278617No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT2130.20651942058213268No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC2120.20554984583761562No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACAGGTCAAGGTGGGAGGATG2100.20361069634858153No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC2070.20070197211503035No Hit
CATAGACTTCAGCCCTCACAAGCCTTGACTTGGTCTCATAGAGTTTTGTT2040.1977932478814792No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTATTAAAAATAGAAAAATTAG2000.19391494890341096No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1910.18518877620275748No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1850.17937132773565514No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGGAGACAGCCGCTCACC1840.17840175299113809No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1840.17840175299113809No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1800.17452345401306987No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1740.16870600554596754No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAATACAAAAAAAAT1730.16773643080145048No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1670.16191898233434815No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCTGTATTTCTCCTTCCTGCCAT1670.16191898233434815No Hit
CATAGAGGTGTCCTTTCCCCACTTTATACACTGACGACATGGTTATGTAG1660.1609494075898311No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1650.15997983284531406No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1640.159010258100797No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCGTCCCTCTATCCTCTTGCCTCCG1630.15804068335627994No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1600.15513195912272876No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1600.15513195912272876No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1590.1541623843782117No Hit
CATAGAACCAAAAATGGCTAGGCATGTCTCTCTCCTGTCACCATATGAAG1590.1541623843782117No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1580.15319280963369467No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1570.1522232348891776No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCTCTCTGTCTCCTGTCACCATG1470.14252748744400706No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1450.14058833795497294No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1430.13864918846593885No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC1430.13864918846593885No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC1420.1376796137214218No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1390.13477088948787064No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1360.13186216525431946No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1350.1308925905098024No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTGTTTGCTTTGTCGAAGAT1280.12410556729818302No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1260.12216641780914891No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC1230.11925769357559773No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACTAAAAACACAAAGATTAG1220.11828811883108069No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1210.11731854408656363No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1140.11053152087494426No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAATTAGCGAGGTGTG1100.10665322189687602No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG1070.10374449766332487No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT1070.10374449766332487No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1060.10277492291880781No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)