FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103138
Sequences flagged as poor quality0
Sequence length150
%GC47

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3905137.862863348135505No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG53745.210494677034653No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT21272.0622854815877756No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT20431.9808412030483429No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG16831.631794295022203No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG15321.485388508600128No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA14231.379704861447769No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA13451.3040780313754388No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG12531.2148771548798696No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT11781.1421590490410904No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGCTCTTTGACTTATGAT11541.1188892551726812No Hit
CATAGAACATCGCACACACATGGAACTCCTATGTAATGTCTTATTTTGTT10871.0539277472900386No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA10731.0403537008667998No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA10551.0229013554654929No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT9150.8871608912331053No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGATAGGATGGGTTTTTG8670.8406213034962865No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC8360.8105644864162579No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG7200.6980938160522795No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT6910.6699761484612848No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG5310.5148441893385561No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG4720.4576392794120499No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG4370.42370416335395295No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC3740.36262095444937853No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT3740.36262095444937853No Hit
CATAGACCATCCTCCCACCTTGACCTCCCGAGTAGCTGGGACTACAGGTG3640.35292520700420793No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATACGGTAGCAGAGGCACTTG3520.3412903100700033No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG3500.3393511605809692No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG3390.32868583839128157No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG3130.3034768950338382No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGTG3110.30153774554480406No Hit
CATAGAAGCAGCATTGATCATCCTCCAATTCTGTCCCATCTCAAGTCTCA2960.2869941243770482No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCAGAGGCACTTGGTC2880.27923752642091176No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG2540.24627198510733195No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTGGCTTGGACTACAGGTG2520.24433283561829783No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2410.2336675134286102No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2400.23269793868409316No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2390.2317283639395761No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGTACTACAGGCA2390.2317283639395761No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG2390.2317283639395761No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCATTTTAACACAGCA2380.23075878919505904No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG2310.22397176598343968No Hit
CATAGAACATCGCACACACATGGAACAAAACTCTATGAGACCAAGTCAAG2110.20458027109309856No Hit
CATAGACCATCCTCCCACCTTGACCTGTAGGATGGGTTTTTGCCAGATAG2010.19488452364792802No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGACTACAGGCA2000.19391494890341096No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1930.18712792569179157No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA1910.18518877620275748No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA1910.18518877620275748No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1890.18324962671372336No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGACTACAGGTG1870.18131047722468926No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1850.17937132773565514No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAAGGAAGCAAGCATATC1790.1735538792685528No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGGGATAGTTTGAGGGTAATGC1780.17258430452403575No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1760.17064515503500166No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1710.16579728131241636No Hit
CATAGAGGGACGGAGGCAAGAGGATAGAGGGACGGAGGCACTTGGTCCAG1690.16385813182338227No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTATAAAGTG1670.16191898233434815No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1650.15997983284531406No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1630.15804068335627994No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAGGGGAAGCAAG1600.15513195912272876No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1590.1541623843782117No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1590.1541623843782117No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1540.14931451065562645No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1520.14737536116659233No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGAAGCAAACACGTC1460.14155791269949No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1360.13186216525431946No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1340.12992301576528534No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1300.12604471678721713No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1280.12410556729818302No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTA1280.12410556729818302No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1260.12216641780914891No Hit
CATAGAAGGTGATAATCATGACAGCCAATTCATCTTCGACAAAGCAAACA1260.12216641780914891No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1250.12119684306463184No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1200.11634896934204658No Hit
CATAGACCATCCTCCCACCTTGACCTCCATGAGTAGTTGGGACTACAGGT1170.11344024510849542No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1110.10762279664139308No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT1070.10374449766332487No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG1040.1008357734297737No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)