FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77294
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4021352.02603048102053No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG36494.720935648303878No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT32854.250006468807411No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC13371.7297591016120268No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA13251.7142339638264288No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG11681.5111134111315239No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT7640.9884337723497296No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG6500.8409449633865501No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA4960.6417056951380443No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA4850.6274743188345797No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT4570.5912489973348514No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT3950.5110357854425959No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT3920.5071545009961964No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT3660.47351670246073435No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT3470.44893523430020443No Hit
CATAGACACATGTAGGATGGGGTGGCTGGCTGCCTGGCTGGCTGATTGGC3040.3933034905684788No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGCCATCACAGTTCATTGTAT2950.3816596372292804No Hit
CATAGAAGAGTGAGACTTGAGATGGGACCCAGTAGCAAGATAGGACAGAA2780.3596656920330168No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTCTGGAGGATGATCAAT2710.3506093616580847No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2090.27039614976582915No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTAGACCTGCG2080.269102388283696No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA2050.2652211038372966No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2010.26004605790876395No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT1930.2496959660516987No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTTGGCTGTCATGATTATCAC1930.2496959660516987No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1910.2471084430874324No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1760.22770202085543512No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1740.22511449789116877No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1740.22511449789116877No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1600.20700183714130466No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT1530.19794550676637254No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1500.19406422231997308No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1380.17853908453437525No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1320.1707765156415763No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1310.16948275415944317No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT1280.1656014697130437No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1280.1656014697130437No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1270.16430770823091054No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTTTAAGA1250.16172018526664425No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1220.15783890082024477No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT1200.15525137785597848No Hit
CATAGAGATAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT1130.1461950474810464No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1120.14490128599891325No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1110.14360752451678008No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1100.14231376303464693No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1100.14231376303464693No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1100.14231376303464693No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1090.14102000155251376No Hit
CATAGAGGGTGCTCCTGTACTGGCTGTGCTGGGTAGTGGTAGTCTATGAG1030.13325743265971488No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG990.12808238673118225No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA980.1267886252490491No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCAAGTCCTCACGCTGTGCTG980.1267886252490491No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT970.12549486376691593No Hit
CATAGATGAAAGACAAGCAGGGAAGCTCCCTATGGACTGCGTGGGCTGGG960.12420110228478277No Hit
CATAGAACCAAAAATGGCTAGGCATGTGCCATCACAGTTCATTGTATTCT950.12290734080264963No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG940.12161357932051646No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG910.117732294874117No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC900.11643853339198386No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC900.11643853339198386No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC830.10738220301705177No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG820.10608844153491863No Hit
CATAGATGAAAGACAAGCAGGGAAGCAAAACTCTATGAGACAGGTCAAGG800.10350091857065233No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG800.10350091857065233No Hit
CATAGACACATGTAGGATGGGGTGGCATGTGCTTGTTGTCCCAGCTACTT780.100913395606386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)